Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.47■□□□□ 0.71
HTRA2O43464 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTRA2O43464 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
HTRA2O43464 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HTRA2O43464 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTRA2O43464 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTRA2O43464 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HTRA2O43464 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTRA2O43464 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.46■□□□□ 0.71
HTRA2O43464 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HTRA2O43464 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
HTRA2O43464 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HTRA2O43464 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTRA2O43464 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HTRA2O43464 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.46■□□□□ 0.71
HTRA2O43464 MESTP1-201ENST00000404287 994 ntBASIC19.46■□□□□ 0.71
HTRA2O43464 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.46■□□□□ 0.71
HTRA2O43464 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HTRA2O43464 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.46■□□□□ 0.71
HTRA2O43464 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.46■□□□□ 0.71
HTRA2O43464 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.46■□□□□ 0.71
HTRA2O43464 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.46■□□□□ 0.71
HTRA2O43464 BX323043.1-201ENST00000641006 1765 ntBASIC19.46■□□□□ 0.71
HTRA2O43464 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.46■□□□□ 0.71
HTRA2O43464 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
HTRA2O43464 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTRA2O43464 KRT17P2-201ENST00000300992 1314 ntBASIC19.46■□□□□ 0.71
HTRA2O43464 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTRA2O43464 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTRA2O43464 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HTRA2O43464 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTRA2O43464 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.45■□□□□ 0.7
HTRA2O43464 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTRA2O43464 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTRA2O43464 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.45■□□□□ 0.7
HTRA2O43464 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HTRA2O43464 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HTRA2O43464 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HTRA2O43464 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.45■□□□□ 0.7
HTRA2O43464 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.45■□□□□ 0.7
HTRA2O43464 AL355355.2-201ENST00000442321 338 ntBASIC19.45■□□□□ 0.7
HTRA2O43464 AP003071.4-201ENST00000562276 1284 ntBASIC19.45■□□□□ 0.7
HTRA2O43464 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.45■□□□□ 0.7
HTRA2O43464 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.45■□□□□ 0.7
HTRA2O43464 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HTRA2O43464 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.45■□□□□ 0.7
HTRA2O43464 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HTRA2O43464 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
HTRA2O43464 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTRA2O43464 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HTRA2O43464 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTRA2O43464 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.45■□□□□ 0.7
HTRA2O43464 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HTRA2O43464 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA2O43464 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA2O43464 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.44■□□□□ 0.7
HTRA2O43464 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.44■□□□□ 0.7
HTRA2O43464 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.44■□□□□ 0.7
HTRA2O43464 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA2O43464 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA2O43464 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.44■□□□□ 0.7
HTRA2O43464 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA2O43464 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HTRA2O43464 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA2O43464 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.44■□□□□ 0.7
HTRA2O43464 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.44■□□□□ 0.7
HTRA2O43464 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
HTRA2O43464 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA2O43464 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.44■□□□□ 0.7
HTRA2O43464 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.44■□□□□ 0.7
HTRA2O43464 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.44■□□□□ 0.7
HTRA2O43464 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.44■□□□□ 0.7
HTRA2O43464 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.44■□□□□ 0.7
HTRA2O43464 REXO1L10P-201ENST00000615707 1290 ntBASIC19.44■□□□□ 0.7
HTRA2O43464 REXO1L12P-201ENST00000622156 912 ntBASIC19.44■□□□□ 0.7
HTRA2O43464 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA2O43464 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HTRA2O43464 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA2O43464 RCC2P6-201ENST00000526625 1557 ntBASIC19.44■□□□□ 0.7
HTRA2O43464 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA2O43464 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA2O43464 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA2O43464 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA2O43464 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.43■□□□□ 0.7
HTRA2O43464 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HTRA2O43464 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA2O43464 FSCN1P1-201ENST00000568912 1481 ntBASIC19.43■□□□□ 0.7
HTRA2O43464 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA2O43464 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA2O43464 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA2O43464 KRT8P41-201ENST00000533985 1514 ntBASIC19.43■□□□□ 0.7
HTRA2O43464 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA2O43464 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA2O43464 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HTRA2O43464 B3GAT3P1-201ENST00000471720 806 ntBASIC19.43■□□□□ 0.7
HTRA2O43464 AC011506.1-201ENST00000474329 610 ntBASIC19.43■□□□□ 0.7
HTRA2O43464 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.43■□□□□ 0.7
HTRA2O43464 MIR6786-201ENST00000616843 113 ntBASIC19.43■□□□□ 0.7
HTRA2O43464 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HTRA2O43464 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms