Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXA2O43364 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
HOXA2O43364 AC007375.3-201ENST00000600936 2314 ntBASIC20.64■□□□□ 0.89
HOXA2O43364 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HOXA2O43364 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA2O43364 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA2O43364 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA2O43364 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.63■□□□□ 0.89
HOXA2O43364 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.63■□□□□ 0.89
HOXA2O43364 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXA2O43364 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA2O43364 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA2O43364 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA2O43364 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXA2O43364 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA2O43364 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXA2O43364 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA2O43364 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXA2O43364 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HOXA2O43364 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA2O43364 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA2O43364 AC104417.2-201ENST00000562989 1793 ntBASIC20.62■□□□□ 0.89
HOXA2O43364 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA2O43364 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HOXA2O43364 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXA2O43364 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA2O43364 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA2O43364 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA2O43364 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.62■□□□□ 0.89
HOXA2O43364 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.62■□□□□ 0.89
HOXA2O43364 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXA2O43364 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXA2O43364 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA2O43364 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXA2O43364 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA2O43364 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.62■□□□□ 0.89
HOXA2O43364 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
HOXA2O43364 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXA2O43364 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
HOXA2O43364 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXA2O43364 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA2O43364 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXA2O43364 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXA2O43364 ZNF815P-204ENST00000434898 1737 ntBASIC20.61■□□□□ 0.89
HOXA2O43364 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXA2O43364 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXA2O43364 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXA2O43364 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.61■□□□□ 0.89
HOXA2O43364 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXA2O43364 STARP1-201ENST00000397973 869 ntBASIC20.61■□□□□ 0.89
HOXA2O43364 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.61■□□□□ 0.89
HOXA2O43364 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.61■□□□□ 0.89
HOXA2O43364 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
HOXA2O43364 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.61■□□□□ 0.89
HOXA2O43364 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HOXA2O43364 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HOXA2O43364 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXA2O43364 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXA2O43364 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXA2O43364 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HOXA2O43364 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.61■□□□□ 0.89
HOXA2O43364 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HOXA2O43364 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HOXA2O43364 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.6■□□□□ 0.89
HOXA2O43364 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HOXA2O43364 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXA2O43364 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXA2O43364 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.6■□□□□ 0.89
HOXA2O43364 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXA2O43364 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HOXA2O43364 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.6■□□□□ 0.89
HOXA2O43364 AL136038.3-201ENST00000561909 1096 ntBASIC20.6■□□□□ 0.89
HOXA2O43364 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
HOXA2O43364 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HOXA2O43364 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXA2O43364 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.6■□□□□ 0.89
HOXA2O43364 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXA2O43364 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXA2O43364 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.59■□□□□ 0.89
HOXA2O43364 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXA2O43364 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXA2O43364 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXA2O43364 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HOXA2O43364 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXA2O43364 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXA2O43364 KRT18P38-201ENST00000449496 1282 ntBASIC20.59■□□□□ 0.89
HOXA2O43364 KRT18P56-201ENST00000507275 550 ntBASIC20.59■□□□□ 0.89
HOXA2O43364 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.59■□□□□ 0.89
HOXA2O43364 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXA2O43364 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.59■□□□□ 0.89
HOXA2O43364 AC116407.4-201ENST00000623319 1061 ntBASIC20.59■□□□□ 0.89
HOXA2O43364 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXA2O43364 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXA2O43364 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXA2O43364 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXA2O43364 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXA2O43364 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXA2O43364 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXA2O43364 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HOXA2O43364 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms