Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK2O43353 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK2O43353 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK2O43353 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK2O43353 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK2O43353 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
RIPK2O43353 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK2O43353 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK2O43353 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK2O43353 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RIPK2O43353 ZNRF2P3-201ENST00000424200 374 ntBASIC19.58■□□□□ 0.72
RIPK2O43353 AC137761.2-201ENST00000561729 223 ntBASIC19.58■□□□□ 0.72
RIPK2O43353 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.58■□□□□ 0.72
RIPK2O43353 AC145350.3-201ENST00000569033 163 ntBASIC19.58■□□□□ 0.72
RIPK2O43353 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.58■□□□□ 0.72
RIPK2O43353 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RIPK2O43353 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RIPK2O43353 BID-214ENST00000617586 542 ntTSL 5 BASIC19.58■□□□□ 0.72
RIPK2O43353 AC008694.1-202ENST00000636953 945 ntBASIC19.58■□□□□ 0.72
RIPK2O43353 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK2O43353 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RIPK2O43353 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.58■□□□□ 0.72
RIPK2O43353 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK2O43353 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RIPK2O43353 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
RIPK2O43353 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK2O43353 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
RIPK2O43353 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.58■□□□□ 0.72
RIPK2O43353 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK2O43353 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RIPK2O43353 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK2O43353 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK2O43353 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.57■□□□□ 0.72
RIPK2O43353 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.57■□□□□ 0.72
RIPK2O43353 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.57■□□□□ 0.72
RIPK2O43353 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK2O43353 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK2O43353 AC068880.1-201ENST00000507289 2297 ntBASIC19.57■□□□□ 0.72
RIPK2O43353 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.57■□□□□ 0.72
RIPK2O43353 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK2O43353 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK2O43353 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.57■□□□□ 0.72
RIPK2O43353 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RIPK2O43353 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK2O43353 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK2O43353 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.57■□□□□ 0.72
RIPK2O43353 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK2O43353 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK2O43353 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.57■□□□□ 0.72
RIPK2O43353 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.57■□□□□ 0.72
RIPK2O43353 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.57■□□□□ 0.72
RIPK2O43353 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RIPK2O43353 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK2O43353 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.56■□□□□ 0.72
RIPK2O43353 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.56■□□□□ 0.72
RIPK2O43353 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK2O43353 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK2O43353 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.56■□□□□ 0.72
RIPK2O43353 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.56■□□□□ 0.72
RIPK2O43353 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK2O43353 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK2O43353 AC011767.1-201ENST00000617410 1153 ntBASIC19.56■□□□□ 0.72
RIPK2O43353 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.56■□□□□ 0.72
RIPK2O43353 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.56■□□□□ 0.72
RIPK2O43353 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.56■□□□□ 0.72
RIPK2O43353 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK2O43353 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RIPK2O43353 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK2O43353 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RIPK2O43353 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK2O43353 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.55■□□□□ 0.72
RIPK2O43353 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.55■□□□□ 0.72
RIPK2O43353 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RIPK2O43353 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
RIPK2O43353 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK2O43353 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK2O43353 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK2O43353 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK2O43353 GPX1P1-201ENST00000388829 606 ntBASIC19.55■□□□□ 0.72
RIPK2O43353 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RIPK2O43353 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.55■□□□□ 0.72
RIPK2O43353 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.55■□□□□ 0.72
RIPK2O43353 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.55■□□□□ 0.72
RIPK2O43353 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK2O43353 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RIPK2O43353 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK2O43353 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.55■□□□□ 0.72
RIPK2O43353 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK2O43353 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.55■□□□□ 0.72
RIPK2O43353 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.55■□□□□ 0.72
RIPK2O43353 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK2O43353 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK2O43353 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK2O43353 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK2O43353 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RIPK2O43353 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 ANO7L1-203ENST00000602586 1720 ntBASIC19.54■□□□□ 0.72
RIPK2O43353 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms