Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
NDUFA1O15239 NOC2LP2-201ENST00000407594 1944 ntBASIC13.19□□□□□ -0.3
NDUFA1O15239 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NDUFA1O15239 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NDUFA1O15239 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.18□□□□□ -0.3
NDUFA1O15239 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NDUFA1O15239 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.18□□□□□ -0.3
NDUFA1O15239 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
NDUFA1O15239 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
NDUFA1O15239 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NDUFA1O15239 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.18□□□□□ -0.3
NDUFA1O15239 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NDUFA1O15239 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
NDUFA1O15239 KRT8P17-201ENST00000453110 1448 ntBASIC13.18□□□□□ -0.3
NDUFA1O15239 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
NDUFA1O15239 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.18□□□□□ -0.3
NDUFA1O15239 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
NDUFA1O15239 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NDUFA1O15239 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NDUFA1O15239 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NDUFA1O15239 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.18□□□□□ -0.3
NDUFA1O15239 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.18□□□□□ -0.3
NDUFA1O15239 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NDUFA1O15239 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA1O15239 BICD1-207ENST00000551848 1962 ntBASIC13.18□□□□□ -0.3
NDUFA1O15239 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.18□□□□□ -0.3
NDUFA1O15239 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NDUFA1O15239 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 AL031598.1-201ENST00000561511 1773 ntBASIC13.17□□□□□ -0.3
NDUFA1O15239 Z98044.1-201ENST00000632503 1764 ntBASIC13.17□□□□□ -0.3
NDUFA1O15239 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.17□□□□□ -0.3
NDUFA1O15239 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NDUFA1O15239 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 AL354751.1-201ENST00000412768 1863 ntBASIC13.17□□□□□ -0.3
NDUFA1O15239 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 AC093525.10-201ENST00000625130 1569 ntBASIC13.17□□□□□ -0.3
NDUFA1O15239 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NDUFA1O15239 MCRIP2P1-201ENST00000394346 511 ntBASIC13.17□□□□□ -0.3
NDUFA1O15239 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.17□□□□□ -0.3
NDUFA1O15239 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.17□□□□□ -0.3
NDUFA1O15239 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.17□□□□□ -0.3
NDUFA1O15239 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.17□□□□□ -0.3
NDUFA1O15239 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.17□□□□□ -0.3
NDUFA1O15239 KRT18P61-201ENST00000585825 1298 ntBASIC13.17□□□□□ -0.3
NDUFA1O15239 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NDUFA1O15239 AC100791.3-201ENST00000617619 330 ntBASIC13.17□□□□□ -0.3
NDUFA1O15239 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 AC141586.3-201ENST00000562166 1838 ntBASIC13.17□□□□□ -0.3
NDUFA1O15239 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 NOC2LP1-202ENST00000452600 2235 ntBASIC13.17□□□□□ -0.3
NDUFA1O15239 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NDUFA1O15239 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.17□□□□□ -0.3
NDUFA1O15239 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.17□□□□□ -0.3
NDUFA1O15239 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.17□□□□□ -0.3
NDUFA1O15239 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NDUFA1O15239 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.17□□□□□ -0.3
NDUFA1O15239 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA1O15239 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA1O15239 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFA1O15239 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NDUFA1O15239 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFA1O15239 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms