Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL353807.1-201ENST00000427475 662 ntBASIC20.55■□□□□ 0.88
O00370 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
O00370 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.55■□□□□ 0.88
O00370 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
O00370 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
O00370 AP002982.1-201ENST00000492365 877 ntBASIC20.55■□□□□ 0.88
O00370 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
O00370 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.55■□□□□ 0.88
O00370 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
O00370 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.55■□□□□ 0.88
O00370 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
O00370 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
O00370 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.55■□□□□ 0.88
O00370 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
O00370 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.54■□□□□ 0.88
O00370 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
O00370 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
O00370 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.54■□□□□ 0.88
O00370 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
O00370 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.54■□□□□ 0.88
O00370 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.54■□□□□ 0.88
O00370 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.54■□□□□ 0.88
O00370 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.54■□□□□ 0.88
O00370 AL445675.2-201ENST00000620291 557 ntBASIC20.54■□□□□ 0.88
O00370 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.54■□□□□ 0.88
O00370 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.54■□□□□ 0.88
O00370 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
O00370 AL135905.2-201ENST00000584934 1404 ntBASIC20.53■□□□□ 0.88
O00370 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.53■□□□□ 0.88
O00370 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
O00370 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.53■□□□□ 0.88
O00370 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
O00370 RPS2P55-201ENST00000397318 883 ntBASIC20.53■□□□□ 0.88
O00370 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
O00370 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
O00370 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
O00370 RPS2P4-201ENST00000476944 856 ntBASIC20.53■□□□□ 0.88
O00370 AC107956.1-201ENST00000494359 873 ntBASIC20.53■□□□□ 0.88
O00370 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.53■□□□□ 0.88
O00370 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.53■□□□□ 0.88
O00370 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.53■□□□□ 0.88
O00370 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.53■□□□□ 0.88
O00370 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.53■□□□□ 0.88
O00370 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
O00370 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
O00370 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
O00370 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.53■□□□□ 0.88
O00370 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
O00370 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.53■□□□□ 0.88
O00370 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.53■□□□□ 0.88
O00370 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
O00370 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.53■□□□□ 0.88
O00370 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.53■□□□□ 0.88
O00370 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.53■□□□□ 0.88
O00370 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
O00370 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
O00370 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.52■□□□□ 0.88
O00370 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
O00370 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
O00370 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
O00370 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
O00370 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
O00370 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
O00370 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
O00370 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
O00370 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
O00370 AC012618.2-201ENST00000428058 849 ntBASIC20.52■□□□□ 0.88
O00370 KSR1P1-201ENST00000446298 240 ntBASIC20.52■□□□□ 0.88
O00370 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.52■□□□□ 0.88
O00370 AC008550.1-201ENST00000511500 884 ntBASIC20.52■□□□□ 0.88
O00370 AC233702.5-201ENST00000584107 538 ntBASIC20.52■□□□□ 0.88
O00370 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.52■□□□□ 0.88
O00370 Z99916.2-201ENST00000604037 246 ntBASIC20.52■□□□□ 0.88
O00370 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.52■□□□□ 0.88
O00370 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
O00370 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
O00370 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
O00370 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
O00370 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.52■□□□□ 0.88
O00370 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
O00370 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms