Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 AC004980.1-204ENST00000429707 299 ntBASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 B3GAT3P1-201ENST00000471720 806 ntBASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 AC026271.3-201ENST00000571884 352 ntBASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 MESTP1-201ENST00000404287 994 ntBASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 AC011506.1-201ENST00000474329 610 ntBASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA3F8WFD2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 KRT18P22-201ENST00000402024 1347 ntBASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 AC010947.1-201ENST00000623454 693 ntBASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA3F8WFD2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 AC005521.1-201ENST00000393351 872 ntBASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 CRYGFP-201ENST00000418459 633 ntBASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 AC097488.1-201ENST00000507834 756 ntBASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPA3F8WFD2 HLA-A-209ENST00000638375 975 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms