Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 AL353719.1-201ENST00000566847 864 ntBASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 AL023803.3-201ENST00000615559 522 ntBASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 CA15P1-201ENST00000481698 905 ntBASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 WWOX-216ENST00000569818 525 ntBASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 AC087388.1-201ENST00000571370 1112 ntBASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 TCF3P1-201ENST00000423021 1937 ntBASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TBC1D3FA6NER0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 LINC01521-201ENST00000504184 1943 ntBASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D3FA6NER0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 AC139887.4-201ENST00000607877 719 ntBASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 AL138966.2-201ENST00000621997 464 ntBASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.17■□□□□ 0.66
TBC1D3FA6NER0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms