Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00862A6NCI5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00862A6NCI5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00862A6NCI5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00862A6NCI5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LINC00862A6NCI5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LINC00862A6NCI5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00862A6NCI5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00862A6NCI5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LINC00862A6NCI5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00862A6NCI5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00862A6NCI5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 AC019171.1-201ENST00000601251 1056 ntBASIC15.69■□□□□ 0.1
LINC00862A6NCI5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 AC092850.2-201ENST00000623821 2697 ntBASIC15.69■□□□□ 0.1
LINC00862A6NCI5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00862A6NCI5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 AL121761.2-201ENST00000598007 1648 ntBASIC15.68■□□□□ 0.1
LINC00862A6NCI5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 PCDHB19P-201ENST00000570871 2371 ntBASIC15.68■□□□□ 0.1
LINC00862A6NCI5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 Z92544.1-202ENST00000571933 1220 ntBASIC15.68■□□□□ 0.1
LINC00862A6NCI5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00862A6NCI5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 DUX4L9-201ENST00000449051 1259 ntBASIC15.67■□□□□ 0.1
LINC00862A6NCI5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00862A6NCI5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms