Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV4A0A0B4J268 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV4A0A0B4J268 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV4A0A0B4J268 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.9□□□□□ -0.19
TRAV4A0A0B4J268 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.9□□□□□ -0.19
TRAV4A0A0B4J268 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV4A0A0B4J268 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 AL032819.2-201ENST00000624543 2162 ntBASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 AL355802.2-201ENST00000402069 882 ntBASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV4A0A0B4J268 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms