Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 AC083906.6-201ENST00000641366 219 ntBASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 AC092368.3-202ENST00000574180 1591 ntBASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 AL121829.2-201ENST00000620908 328 ntBASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRBV5-3A0A0A0MS03 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 AL354751.1-201ENST00000412768 1863 ntBASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 TUBB8P6-201ENST00000436895 1288 ntBASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 PNMA6B-201ENST00000538162 1200 ntBASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 AC120498.8-201ENST00000614275 531 ntBASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV5-3A0A0A0MS03 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-3A0A0A0MS03 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms