Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 AC006333.2-201ENST00000607957 2099 ntBASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV27A0A087WT01 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV27A0A087WT01 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.46■□□□□ 0.38
TRAV27A0A087WT01 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
TRAV27A0A087WT01 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV27A0A087WT01 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 CROCCP3-202ENST00000420820 1947 ntBASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 AC069152.1-201ENST00000438030 544 ntBASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 AC092666.2-201ENST00000613287 246 ntBASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV27A0A087WT01 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 AC008687.6-201ENST00000596318 630 ntBASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 AC133041.1-202ENST00000642053 222 ntBASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV27A0A087WT01 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms