Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 AC141257.3-201ENST00000572906 215 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 AC006115.2-201ENST00000596823 202 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 MIR8062-201ENST00000621515 85 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 OR2L1P-202ENST00000641567 1023 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 PNPT1P2-201ENST00000456768 2050 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 SDAD1P2-201ENST00000441308 2028 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 C4BPAP1-201ENST00000415474 1893 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 RNU6-462P-201ENST00000362659 105 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 AL591416.1-201ENST00000404015 867 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 MIR548K-201ENST00000408406 116 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 RN7SKP59-201ENST00000410520 314 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 MRPL53P1-201ENST00000414323 319 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 HMGB3P24-201ENST00000433260 622 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 SKP1P1-201ENST00000438081 489 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 AL663074.2-201ENST00000440621 479 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 AC092809.1-201ENST00000441469 474 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 RNU6-943P-201ENST00000516960 98 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 BNIP3P6-201ENST00000549284 499 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 NMNAT1P1-201ENST00000554095 876 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 AC015720.2-201ENST00000567709 334 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 AC060780.2-201ENST00000589047 198 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 AC132825.1-201ENST00000463573 2247 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 LINC01963-201ENST00000562038 3148 ntBASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.37□□□□□ -1.23
PDZRN3Q9UPQ7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 RNU6-1120P-201ENST00000362988 108 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 RNU6-886P-201ENST00000384319 105 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 RNU6-171P-201ENST00000384354 107 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 Y_RNA.645-201ENST00000391229 102 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AL133270.1-201ENST00000402635 279 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 MIR548F5-201ENST00000408421 86 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AL590609.2-201ENST00000421430 368 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AC112206.1-201ENST00000468416 477 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 RN7SL583P-201ENST00000475692 287 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AC083904.1-201ENST00000487828 231 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AC112204.1-201ENST00000502591 103 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 SNORA81.3-201ENST00000517283 198 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AC025857.2-201ENST00000602711 238 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 AP000550.3-201ENST00000637734 379 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 PABPC1P6-201ENST00000445594 1829 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 ZNF402P-201ENST00000404435 3100 ntBASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PDZRN3Q9UPQ7 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 AC093297.3-201ENST00000607056 2517 ntBASIC7.35□□□□□ -1.23
PDZRN3Q9UPQ7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms