Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC8.33□□□□□ -1.08
HOXD11P31277 NUTF2P2-201ENST00000551207 384 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 AC087564.1-201ENST00000569751 456 ntTSL 3 BASIC8.33□□□□□ -1.08
HOXD11P31277 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC8.33□□□□□ -1.08
HOXD11P31277 RN7SL785P-201ENST00000578437 253 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 SNRPGP20-201ENST00000604477 205 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 ARF4P1-201ENST00000605447 541 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 RN7SL575P-201ENST00000620774 299 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 AC005796.1-201ENST00000623214 433 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 MFSD8-259ENST00000642042 2303 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC8.33□□□□□ -1.08
HOXD11P31277 AL162171.3-201ENST00000617439 3178 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
HOXD11P31277 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC8.33□□□□□ -1.08
HOXD11P31277 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
HOXD11P31277 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC8.33□□□□□ -1.08
HOXD11P31277 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
HOXD11P31277 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
HOXD11P31277 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXD11P31277 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXD11P31277 ZNF280A-201ENST00000302097 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXD11P31277 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXD11P31277 RN7SKP275-201ENST00000364626 301 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 RN7SKP189-201ENST00000365042 330 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
HOXD11P31277 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
HOXD11P31277 RPL23AP17-201ENST00000401064 499 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 RNA5SP136-201ENST00000410906 107 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 RNU2-32P-201ENST00000411193 191 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXD11P31277 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC8.32□□□□□ -1.08
HOXD11P31277 AL021397.1-201ENST00000451806 248 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 HSPE1P6-201ENST00000479457 291 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 RN7SL89P-201ENST00000480252 283 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC8.32□□□□□ -1.08
HOXD11P31277 TOMM22P4-201ENST00000511318 336 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 RN7SKP277-201ENST00000516895 283 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXD11P31277 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXD11P31277 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC8.32□□□□□ -1.08
HOXD11P31277 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC8.32□□□□□ -1.08
HOXD11P31277 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXD11P31277 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
HOXD11P31277 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
HOXD11P31277 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXD11P31277 OR4F13P-202ENST00000560066 2054 ntBASIC8.32□□□□□ -1.08
HOXD11P31277 KCNA2-203ENST00000485317 2496 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
HOXD11P31277 TAF9B-201ENST00000341864 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXD11P31277 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
HOXD11P31277 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXD11P31277 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXD11P31277 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXD11P31277 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXD11P31277 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
HOXD11P31277 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXD11P31277 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXD11P31277 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXD11P31277 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.31□□□□□ -1.08
HOXD11P31277 IL33-202ENST00000417746 2327 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXD11P31277 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXD11P31277 AC004158.1-201ENST00000564508 4319 ntBASIC8.31□□□□□ -1.08
HOXD11P31277 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
HOXD11P31277 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 IPO5P1-201ENST00000593576 2887 ntBASIC8.31□□□□□ -1.08
HOXD11P31277 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 CBX3P9-201ENST00000402326 552 ntBASIC8.31□□□□□ -1.08
HOXD11P31277 MICG-208ENST00000416822 132 ntBASIC8.31□□□□□ -1.08
HOXD11P31277 PPIL1P1-201ENST00000423936 499 ntBASIC8.31□□□□□ -1.08
HOXD11P31277 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXD11P31277 AC009244.1-201ENST00000450566 258 ntBASIC8.31□□□□□ -1.08
HOXD11P31277 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC8.31□□□□□ -1.08
HOXD11P31277 AL132838.2-201ENST00000492041 314 ntBASIC8.31□□□□□ -1.08
HOXD11P31277 DNM1P34-202ENST00000567850 315 ntBASIC8.31□□□□□ -1.08
HOXD11P31277 AC060780.2-201ENST00000589047 198 ntBASIC8.31□□□□□ -1.08
HOXD11P31277 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC8.31□□□□□ -1.08
HOXD11P31277 MIR6729-201ENST00000618194 65 ntBASIC8.31□□□□□ -1.08
HOXD11P31277 pRNA.9-201ENST00000618609 89 ntBASIC8.31□□□□□ -1.08
HOXD11P31277 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
HOXD11P31277 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.31□□□□□ -1.08
HOXD11P31277 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
HOXD11P31277 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXD11P31277 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
HOXD11P31277 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms