Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC004009.2-201ENST00000623016 728 ntBASIC5.61□□□□□ -1.51
ITGA4P13612 U6.101-201ENST00000637707 76 ntBASIC5.61□□□□□ -1.51
ITGA4P13612 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.61□□□□□ -1.51
ITGA4P13612 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ITGA4P13612 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
ITGA4P13612 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ITGA4P13612 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ITGA4P13612 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.6□□□□□ -1.51
ITGA4P13612 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ITGA4P13612 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ITGA4P13612 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ITGA4P13612 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ITGA4P13612 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ITGA4P13612 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ITGA4P13612 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.6□□□□□ -1.51
ITGA4P13612 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.6□□□□□ -1.51
ITGA4P13612 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ITGA4P13612 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ITGA4P13612 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ITGA4P13612 CBX3P1-201ENST00000325243 554 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ITGA4P13612 RN7SKP104-201ENST00000362605 328 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 RNU1-85P-201ENST00000364127 164 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 RNU1-74P-201ENST00000384108 171 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 SNORA51.8-201ENST00000384234 132 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 MIR589-201ENST00000385238 99 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ITGA4P13612 RN7SKP114-201ENST00000410327 279 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 RPS3AP9-201ENST00000417027 792 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 USP9YP27-201ENST00000418455 438 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.6□□□□□ -1.51
ITGA4P13612 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.6□□□□□ -1.51
ITGA4P13612 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.6□□□□□ -1.51
ITGA4P13612 KNOP1P3-201ENST00000446933 426 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.6□□□□□ -1.51
ITGA4P13612 AC022431.1-201ENST00000450941 438 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 BX322784.1-201ENST00000455793 1077 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 MTCO3P2-201ENST00000457365 171 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 AC026410.2-201ENST00000460281 156 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.6□□□□□ -1.51
ITGA4P13612 AP000852.1-201ENST00000472460 573 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 RBM43P1-201ENST00000476891 1081 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 RPL7AP10-201ENST00000481016 791 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 COX6B1P2-201ENST00000489624 230 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 AL049874.2-201ENST00000492636 288 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.6□□□□□ -1.51
ITGA4P13612 AC006390.1-201ENST00000508068 283 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.6□□□□□ -1.51
ITGA4P13612 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.6□□□□□ -1.51
ITGA4P13612 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.6□□□□□ -1.51
ITGA4P13612 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.6□□□□□ -1.51
ITGA4P13612 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.6□□□□□ -1.51
ITGA4P13612 AC008127.2-201ENST00000549925 1075 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.6□□□□□ -1.51
ITGA4P13612 MIR3934-201ENST00000579806 107 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 NRBF2P1-201ENST00000587407 859 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 AC008752.3-201ENST00000588113 712 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.6□□□□□ -1.51
ITGA4P13612 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.6□□□□□ -1.51
ITGA4P13612 C8orf59P2-201ENST00000603441 271 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ITGA4P13612 AL158211.4-201ENST00000606988 584 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.6□□□□□ -1.51
ITGA4P13612 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ITGA4P13612 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 AP000550.3-201ENST00000637734 379 ntBASIC5.6□□□□□ -1.51
ITGA4P13612 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
ITGA4P13612 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ITGA4P13612 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ITGA4P13612 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
ITGA4P13612 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ITGA4P13612 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.59□□□□□ -1.51
ITGA4P13612 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ITGA4P13612 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.59□□□□□ -1.51
ITGA4P13612 CASC19-221ENST00000641309 1382 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 AC107081.3-201ENST00000612715 2034 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 GNG5P1-201ENST00000255500 204 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ITGA4P13612 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ITGA4P13612 RNU6-181P-201ENST00000363225 107 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
ITGA4P13612 RPL21P67-201ENST00000402896 478 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 RN7SKP16-201ENST00000410180 299 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ITGA4P13612 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.59□□□□□ -1.51
ITGA4P13612 PIGFP2-201ENST00000421400 651 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.59□□□□□ -1.51
ITGA4P13612 RPEP2-201ENST00000432149 701 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 AC002486.1-201ENST00000435098 391 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 AC006466.1-201ENST00000438721 289 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.59□□□□□ -1.51
ITGA4P13612 AC091685.2-201ENST00000454924 864 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 SEPT7P3-201ENST00000455017 621 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 C1DP4-201ENST00000455429 424 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.59□□□□□ -1.51
ITGA4P13612 RNU6-1218P-201ENST00000458990 108 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 AC108161.1-201ENST00000461060 402 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 RPL7P22-201ENST00000466005 733 ntBASIC5.59□□□□□ -1.51
ITGA4P13612 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ITGA4P13612 AC023598.1-201ENST00000472521 361 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms