Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC027088.4-201ENST00000611559 1947 ntBASIC6.35□□□□□ -1.39
NPAS3Q8IXF0 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.35□□□□□ -1.39
NPAS3Q8IXF0 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AC004972.1-201ENST00000623934 2209 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 Y_RNA.170-201ENST00000363746 110 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 Y_RNA.367-201ENST00000365544 101 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 RNU6-81P-201ENST00000365608 104 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 UBE2V1P2-201ENST00000397758 440 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AC110754.1-201ENST00000399740 601 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AL391417.1-201ENST00000404100 426 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 RPS3AP2-201ENST00000407190 754 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 RN7SKP293-201ENST00000411389 296 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 RPL35AP3-201ENST00000414680 288 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 RBMY1KP-201ENST00000423480 476 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 MYL8P-204ENST00000431574 518 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 SUMO2P3-201ENST00000438311 288 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AC073910.1-201ENST00000445047 438 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 RN7SL269P-201ENST00000467795 305 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 RPL7L1P8-201ENST00000469911 741 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 RPS23P3-201ENST00000470993 430 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AL136038.1-201ENST00000497246 351 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AC009901.1-201ENST00000506703 541 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 RNU5B-3P-201ENST00000516601 115 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 Y_RNA.708-201ENST00000516950 96 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AC090136.1-201ENST00000520009 240 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AC135001.1-201ENST00000544546 283 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 MIR3176-201ENST00000582210 90 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 MIR4443-201ENST00000585052 53 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 AP001485.1-201ENST00000604799 199 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 RPL12P48-201ENST00000605620 304 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 MTCO1P24-201ENST00000515438 1558 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 SHQ1P1-201ENST00000437111 1544 ntBASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS3Q8IXF0 GNL2P1-201ENST00000451274 2190 ntBASIC6.34□□□□□ -1.4
NPAS3Q8IXF0 AC024587.1-201ENST00000505925 2157 ntBASIC6.34□□□□□ -1.4
NPAS3Q8IXF0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
NPAS3Q8IXF0 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
NPAS3Q8IXF0 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
NPAS3Q8IXF0 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
NPAS3Q8IXF0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
NPAS3Q8IXF0 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
NPAS3Q8IXF0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
NPAS3Q8IXF0 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.34□□□□□ -1.4
NPAS3Q8IXF0 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 EIF4E2P1-201ENST00000393781 255 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 MIR548H3-201ENST00000408771 118 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 RNU6-1050P-201ENST00000410388 107 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 PRELID3BP11-201ENST00000414230 479 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 SDHDP6-201ENST00000414693 480 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 BX510359.3-201ENST00000422168 306 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 RPL7P2-201ENST00000427639 268 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 AC236972.1-201ENST00000433225 199 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 CR769767.1-201ENST00000436337 346 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 TRBV8-2-201ENST00000475637 270 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 AC108860.1-201ENST00000484521 383 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.33□□□□□ -1.4
NPAS3Q8IXF0 BTG4P1-201ENST00000510421 183 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms