Protein–RNA interactions for Protein: Q16586

SGCA, Alpha-sarcoglycan, humanhuman

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCAQ16586 AC022031.1-201ENST00000585985 2593 ntBASIC3.34□□□□□ -1.88
SGCAQ16586 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SGCAQ16586 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.34□□□□□ -1.88
SGCAQ16586 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SGCAQ16586 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SGCAQ16586 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SGCAQ16586 RNU4-27P-201ENST00000410889 139 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 HMGB3P31-201ENST00000413333 595 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.33□□□□□ -1.88
SGCAQ16586 AC004022.2-201ENST00000413824 193 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.33□□□□□ -1.88
SGCAQ16586 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SGCAQ16586 AL031736.2-201ENST00000426573 787 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 HIGD1AP12-201ENST00000427832 281 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.33□□□□□ -1.88
SGCAQ16586 RPL21P112-201ENST00000434403 463 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 ELOCP11-201ENST00000436690 332 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.33□□□□□ -1.88
SGCAQ16586 ELOCP16-201ENST00000444494 332 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.33□□□□□ -1.88
SGCAQ16586 NPM1P49-201ENST00000448027 714 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.33□□□□□ -1.88
SGCAQ16586 AP002884.2-201ENST00000471647 395 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 VN1R105P-201ENST00000486595 910 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 RPL30P11-201ENST00000495304 339 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.33□□□□□ -1.88
SGCAQ16586 MTATP6P22-201ENST00000507369 598 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.33□□□□□ -1.88
SGCAQ16586 RNU6-352P-201ENST00000516908 107 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 RNU4-60P-201ENST00000517239 135 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.33□□□□□ -1.88
SGCAQ16586 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.33□□□□□ -1.88
SGCAQ16586 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SGCAQ16586 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SGCAQ16586 OR6C73P-201ENST00000546432 358 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 CYCSP30-201ENST00000546447 172 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.33□□□□□ -1.88
SGCAQ16586 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.33□□□□□ -1.88
SGCAQ16586 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.33□□□□□ -1.88
SGCAQ16586 AC104229.1-201ENST00000561364 255 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.33□□□□□ -1.88
SGCAQ16586 AC090751.1-201ENST00000566966 267 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.33□□□□□ -1.88
SGCAQ16586 AL365400.2-201ENST00000605604 902 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 OR2BH1P-201ENST00000608850 864 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.33□□□□□ -1.88
SGCAQ16586 AC018816.2-201ENST00000621460 353 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 AL354798.1-201ENST00000622505 329 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 AC097372.4-201ENST00000625025 466 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 CDRT1-208ENST00000630868 794 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SGCAQ16586 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.33□□□□□ -1.88
SGCAQ16586 AL512283.1-201ENST00000606756 1384 ntBASIC3.33□□□□□ -1.88
SGCAQ16586 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
SGCAQ16586 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.33□□□□□ -1.88
SGCAQ16586 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SGCAQ16586 AC117529.2-201ENST00000512159 2068 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SGCAQ16586 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.32□□□□□ -1.88
SGCAQ16586 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SGCAQ16586 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
SGCAQ16586 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
SGCAQ16586 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SGCAQ16586 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SGCAQ16586 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SGCAQ16586 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SGCAQ16586 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SGCAQ16586 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.32□□□□□ -1.88
SGCAQ16586 SNORA51.2-201ENST00000364595 132 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 SNORA70E-201ENST00000384492 135 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 EIF5P1-201ENST00000400019 1231 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 PPIAP31-201ENST00000405422 495 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 ATF1P1-201ENST00000406040 927 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
SGCAQ16586 RNU2-72P-201ENST00000411175 163 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 MTND2P15-201ENST00000418575 892 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AL512661.1-201ENST00000434586 1253 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 SKP1P1-201ENST00000438081 489 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.32□□□□□ -1.88
SGCAQ16586 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.32□□□□□ -1.88
SGCAQ16586 NUTF2P7-201ENST00000453086 375 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AC103987.1-201ENST00000473394 348 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AC006483.1-201ENST00000487308 313 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AC027338.1-201ENST00000514840 825 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 RN7SKP209-201ENST00000516888 304 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.32□□□□□ -1.88
SGCAQ16586 COX6B1P6-201ENST00000522347 255 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.32□□□□□ -1.88
SGCAQ16586 MTCO1P49-201ENST00000523429 802 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AC092747.2-201ENST00000545069 983 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SGCAQ16586 AL121766.1-201ENST00000547436 487 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 OR4H12P-201ENST00000556269 907 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.32□□□□□ -1.88
SGCAQ16586 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.32□□□□□ -1.88
SGCAQ16586 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.32□□□□□ -1.88
SGCAQ16586 MIR4697-201ENST00000582977 78 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AC012254.4-201ENST00000588843 273 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.32□□□□□ -1.88
SGCAQ16586 AC092474.3-201ENST00000603022 568 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms