Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.54□□□□□ -2
CXCL1P09341 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CXCL1P09341 AL136164.4-201ENST00000625013 2135 ntBASIC2.54□□□□□ -2
CXCL1P09341 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
CXCL1P09341 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CXCL1P09341 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CXCL1P09341 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.53□□□□□ -2
CXCL1P09341 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.53□□□□□ -2
CXCL1P09341 MTND4P34-201ENST00000572715 1371 ntBASIC2.53□□□□□ -2
CXCL1P09341 AC110774.1-201ENST00000623567 2018 ntBASIC2.53□□□□□ -2
CXCL1P09341 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CXCL1P09341 RPL23AP57-201ENST00000332361 466 ntBASIC2.53□□□□□ -2
CXCL1P09341 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CXCL1P09341 FRG1CP-201ENST00000358464 769 ntBASIC2.53□□□□□ -2
CXCL1P09341 RNA5SP119-201ENST00000362715 117 ntBASIC2.53□□□□□ -2
CXCL1P09341 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.53□□□□□ -2
CXCL1P09341 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CXCL1P09341 RNU6-317P-201ENST00000384031 107 ntBASIC2.53□□□□□ -2
CXCL1P09341 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.53□□□□□ -2
CXCL1P09341 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.53□□□□□ -2
CXCL1P09341 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.53□□□□□ -2
CXCL1P09341 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.53□□□□□ -2
CXCL1P09341 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.53□□□□□ -2
CXCL1P09341 AC006994.1-201ENST00000438212 839 ntBASIC2.53□□□□□ -2
CXCL1P09341 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.53□□□□□ -2
CXCL1P09341 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.53□□□□□ -2
CXCL1P09341 RPL21P2-201ENST00000440049 481 ntBASIC2.53□□□□□ -2
CXCL1P09341 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.53□□□□□ -2
CXCL1P09341 RRM2P4-201ENST00000441721 562 ntBASIC2.53□□□□□ -2
CXCL1P09341 AC006326.1-201ENST00000445465 787 ntBASIC2.53□□□□□ -2
CXCL1P09341 RPS15AP29-201ENST00000445539 400 ntBASIC2.53□□□□□ -2
CXCL1P09341 VN1R48P-201ENST00000448149 1036 ntBASIC2.53□□□□□ -2
CXCL1P09341 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.53□□□□□ -2
CXCL1P09341 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.53□□□□□ -2
CXCL1P09341 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.53□□□□□ -2
CXCL1P09341 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.53□□□□□ -2
CXCL1P09341 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.53□□□□□ -2
CXCL1P09341 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.53□□□□□ -2
CXCL1P09341 AC034244.2-201ENST00000514668 858 ntBASIC2.53□□□□□ -2
CXCL1P09341 RN7SKP43-201ENST00000516173 320 ntBASIC2.53□□□□□ -2
CXCL1P09341 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.53□□□□□ -2
CXCL1P09341 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC2.53□□□□□ -2
CXCL1P09341 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.53□□□□□ -2
CXCL1P09341 SYF2P1-201ENST00000550658 413 ntBASIC2.53□□□□□ -2
CXCL1P09341 AC051619.2-201ENST00000559063 397 ntBASIC2.53□□□□□ -2
CXCL1P09341 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.53□□□□□ -2
CXCL1P09341 AC115085.1-201ENST00000588924 229 ntBASIC2.53□□□□□ -2
CXCL1P09341 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.53□□□□□ -2
CXCL1P09341 AC069304.3-201ENST00000603938 1084 ntBASIC2.53□□□□□ -2
CXCL1P09341 AL392112.1-201ENST00000605115 829 ntBASIC2.53□□□□□ -2
CXCL1P09341 AC016877.3-201ENST00000606778 504 ntBASIC2.53□□□□□ -2
CXCL1P09341 MIR7851-201ENST00000610611 160 ntBASIC2.53□□□□□ -2
CXCL1P09341 AC005962.2-201ENST00000611427 652 ntBASIC2.53□□□□□ -2
CXCL1P09341 AC107871.2-201ENST00000612894 502 ntBASIC2.53□□□□□ -2
CXCL1P09341 AC091903.1-201ENST00000624322 454 ntBASIC2.53□□□□□ -2
CXCL1P09341 AC015726.3-201ENST00000624501 418 ntBASIC2.53□□□□□ -2
CXCL1P09341 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.53□□□□□ -2
CXCL1P09341 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.53□□□□□ -2
CXCL1P09341 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.53□□□□□ -2
CXCL1P09341 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.53□□□□□ -2
CXCL1P09341 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.53□□□□□ -2
CXCL1P09341 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CXCL1P09341 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.53□□□□□ -2
CXCL1P09341 AC092447.7-201ENST00000422212 1621 ntBASIC2.53□□□□□ -2
CXCL1P09341 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
CXCL1P09341 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CXCL1P09341 AC002546.1-201ENST00000588041 2504 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CXCL1P09341 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CXCL1P09341 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CXCL1P09341 RNU1-32P-201ENST00000363937 159 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.52□□□□□ -2.01
CXCL1P09341 MIR30B-201ENST00000384850 88 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CXCL1P09341 AL590290.1-201ENST00000405336 380 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 RPL23AP47-201ENST00000408017 460 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 ATP5A1P2-201ENST00000412323 255 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL1P09341 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL1P09341 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL1P09341 AC007064.3-201ENST00000422608 359 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CXCL1P09341 AL117339.2-201ENST00000430475 180 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 RPL21P112-201ENST00000434403 463 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.52□□□□□ -2.01
CXCL1P09341 HSPE1P28-201ENST00000443139 211 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 RPL31P20-201ENST00000449593 360 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.52□□□□□ -2.01
CXCL1P09341 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.52□□□□□ -2.01
CXCL1P09341 VN1R17P-201ENST00000472048 1090 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 RPS27AP1-201ENST00000475545 471 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 AC112198.1-201ENST00000505369 1220 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL1P09341 AC026402.1-201ENST00000513642 170 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 RN7SKP141-201ENST00000516167 338 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL1P09341 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.52□□□□□ -2.01
CXCL1P09341 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL1P09341 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL1P09341 MIR4474-201ENST00000579189 78 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms