Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC006539.2-201ENST00000601729 572 ntBASIC4.82□□□□□ -1.64
VPS45Q9NRW7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS45Q9NRW7 IMMP1LP1-201ENST00000605170 488 ntBASIC4.82□□□□□ -1.64
VPS45Q9NRW7 AL592221.1-201ENST00000605266 382 ntBASIC4.82□□□□□ -1.64
VPS45Q9NRW7 AC072039.2-201ENST00000608883 439 ntBASIC4.82□□□□□ -1.64
VPS45Q9NRW7 AL139418.1-201ENST00000613613 177 ntBASIC4.82□□□□□ -1.64
VPS45Q9NRW7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS45Q9NRW7 AC073530.2-201ENST00000623987 261 ntBASIC4.82□□□□□ -1.64
VPS45Q9NRW7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS45Q9NRW7 MIR4496-201ENST00000635896 61 ntBASIC4.82□□□□□ -1.64
VPS45Q9NRW7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS45Q9NRW7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS45Q9NRW7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS45Q9NRW7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS45Q9NRW7 OR51H2P-202ENST00000641424 3046 ntBASIC4.82□□□□□ -1.64
VPS45Q9NRW7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS45Q9NRW7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS45Q9NRW7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 RNU6-553P-201ENST00000364047 96 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 RNU6-1300P-201ENST00000391046 108 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AL161909.1-201ENST00000397390 712 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 RPL7P57-201ENST00000423238 740 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 ISCA1P2-201ENST00000438679 421 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC097262.1-201ENST00000452559 548 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC073387.1-201ENST00000453261 709 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 NIP7P2-201ENST00000485801 544 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC005726.1-201ENST00000494679 427 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC117532.1-201ENST00000514638 323 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 RNU6-1225P-201ENST00000516336 65 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 MTCO1P49-201ENST00000523429 802 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 CENPUP2-201ENST00000555897 1186 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AL451086.1-201ENST00000605596 223 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 OR2AS2P-201ENST00000606902 342 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC131235.4-201ENST00000609288 620 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AL161637.1-201ENST00000622380 412 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC091931.1-201ENST00000623488 728 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
VPS45Q9NRW7 AC139713.2-215ENST00000641428 5037 ntBASIC4.81□□□□□ -1.64
VPS45Q9NRW7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC109315.1-201ENST00000584143 1347 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AL442639.1-201ENST00000625030 1899 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 RNU6-931P-201ENST00000363850 107 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 RNU1-64P-201ENST00000365443 163 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 RNU6-921P-201ENST00000384361 107 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 RNU6-441P-201ENST00000384545 106 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 BTBD10P2-201ENST00000404779 676 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 RNA5SP146-201ENST00000410743 123 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AL161449.1-201ENST00000414531 1199 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 FABP7P1-201ENST00000424004 391 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 RPS26P2-201ENST00000440331 348 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 COX6CP18-201ENST00000448769 222 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 RPS27AP8-201ENST00000452665 445 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC146507.1-201ENST00000468335 354 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC011276.1-201ENST00000469688 323 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 RAP1BP2-201ENST00000478270 544 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC091868.1-201ENST00000508746 304 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC109471.1-201ENST00000511631 612 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms