Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTAP4-4Q9BYR3 KLHL12-202ENST00000367259 2257 ntTSL 2 BASIC1.71□□□□□ -2.13
KRTAP4-4Q9BYR3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.13
KRTAP4-4Q9BYR3 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
KRTAP4-4Q9BYR3 R3HDM2-207ENST00000441731 4076 ntTSL 5 BASIC1.71□□□□□ -2.13
KRTAP4-4Q9BYR3 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
KRTAP4-4Q9BYR3 LIPC-203ENST00000414170 2968 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ERICH6B-201ENST00000298738 2421 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ENDOU-202ENST00000422538 2413 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AC005614.1-201ENST00000598952 3653 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 SEMA4A-205ENST00000368286 3135 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 UNC119-205ENST00000484980 4189 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 SMARCAL1-202ENST00000358207 3056 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 THBS4-204ENST00000511733 3094 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AASS-202ENST00000393376 3233 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 HMMR-201ENST00000353866 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 HIPK1-203ENST00000369553 2883 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 XIRP2-205ENST00000409605 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 FAM91A3P-201ENST00000456826 2544 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 VSIG4-204ENST00000455586 2190 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 GRIA1-202ENST00000340592 3170 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 RBFOX1-223ENST00000620507 4018 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 RGS4-204ENST00000421743 3311 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ATP5I-201ENST00000304312 365 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU6-349P-201ENST00000362402 107 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 RN7SKP231-201ENST00000363281 277 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU6-1244P-201ENST00000363614 108 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 RN7SKP246-201ENST00000364553 317 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 SNORD115-38-201ENST00000365037 82 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 IGKV1D-12-201ENST00000377032 371 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU6-811P-201ENST00000384069 107 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 U3.16-201ENST00000384391 209 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 RNVU1-17-201ENST00000384619 164 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 MIR578-201ENST00000384828 96 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 MIR649-201ENST00000384843 97 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 U3.26-201ENST00000391236 204 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AL353692.1-201ENST00000405081 755 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 RNA5SP390-201ENST00000410191 113 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 RNA5SP475-201ENST00000410568 110 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 SNORA7.5-201ENST00000410672 110 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 SNX18P13-201ENST00000412442 529 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AC092580.2-201ENST00000414654 469 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 HMGA1P6-201ENST00000418454 391 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 CHCHD2P5-201ENST00000421414 400 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AC092100.1-203ENST00000421513 653 ntTSL 3 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AL136309.3-201ENST00000427591 266 ntTSL 3 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AC005300.1-201ENST00000428401 373 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms