Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM11Q96F44 MFSD8-239ENST00000641590 2479 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM11Q96F44 CASC19-260ENST00000641828 2001 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM11Q96F44 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM11Q96F44 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM11Q96F44 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AF287957.1-201ENST00000607368 1595 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 Y_RNA.301-201ENST00000364990 103 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 RNU6-1032P-201ENST00000384100 107 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 MIR506-201ENST00000384998 124 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 MIR130B-202ENST00000385018 82 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM11Q96F44 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 RNU6-370P-201ENST00000411008 104 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 RNU6-1304P-201ENST00000411374 106 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC096644.2-201ENST00000429278 159 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 ERLEC1P1-201ENST00000433806 578 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 PNKDP1-201ENST00000435914 430 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 RPL7P59-201ENST00000447700 943 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC093166.3-201ENST00000448785 303 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 TRGVB-201ENST00000453257 471 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC138866.2-201ENST00000508650 584 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 RNU6-976P-201ENST00000516086 111 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 RN7SKP35-201ENST00000517210 151 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 HMGB1P19-201ENST00000517578 577 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 WBP1LP3-201ENST00000523033 208 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 AP003072.2-201ENST00000527756 676 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 OR5B10P-201ENST00000532869 642 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 AP002373.2-201ENST00000541631 1060 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC007375.1-201ENST00000554513 578 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC138207.8-204ENST00000579588 527 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC100812.1-201ENST00000607622 580 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 MIR6809-201ENST00000612189 116 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC022400.9-201ENST00000623633 273 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM11Q96F44 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM11Q96F44 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AP004607.3-201ENST00000530354 3915 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM11Q96F44 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 AL354854.1-201ENST00000455940 1363 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 ZNF807-201ENST00000328088 1707 ntBASIC6.16□□□□□ -1.42
TRIM11Q96F44 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM11Q96F44 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TRIM11Q96F44 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM11Q96F44 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
TRIM11Q96F44 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM11Q96F44 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM11Q96F44 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM11Q96F44 AC027088.4-201ENST00000611559 1947 ntBASIC6.15□□□□□ -1.42
TRIM11Q96F44 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM11Q96F44 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM11Q96F44 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM11Q96F44 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM11Q96F44 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
TRIM11Q96F44 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
TRIM11Q96F44 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM11Q96F44 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
TRIM11Q96F44 RNU6-108P-201ENST00000365558 107 ntBASIC6.15□□□□□ -1.42
TRIM11Q96F44 AL591416.1-201ENST00000404015 867 ntBASIC6.15□□□□□ -1.42
TRIM11Q96F44 RPL7P25-201ENST00000404151 721 ntBASIC6.15□□□□□ -1.42
TRIM11Q96F44 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM11Q96F44 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM11Q96F44 AL354868.1-201ENST00000417077 482 ntBASIC6.15□□□□□ -1.42
TRIM11Q96F44 AL807761.1-201ENST00000417622 171 ntBASIC6.15□□□□□ -1.42
TRIM11Q96F44 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms