Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 GTF2IP8-201ENST00000560687 584 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC106785.1-201ENST00000565935 262 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 PRPF19P1-201ENST00000584766 898 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 BNIP3P22-201ENST00000593399 556 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 ELOCP34-201ENST00000604436 327 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC018695.5-201ENST00000605872 315 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC025253.1-201ENST00000613623 543 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 OR14L1P-202ENST00000641545 3009 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 RNU6-839P-201ENST00000363347 108 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 RNU6-666P-201ENST00000363499 107 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 RNU6-259P-201ENST00000383999 107 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 RNA5SP498-201ENST00000411342 120 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 RAD23BP1-201ENST00000421404 1227 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 ISCA1P1-201ENST00000426679 387 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 RPL31P54-201ENST00000429803 370 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AL512286.1-201ENST00000439244 400 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AC079168.2-201ENST00000453977 416 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 DNAJC19P1-201ENST00000455312 319 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 RNU6-528P-201ENST00000516926 100 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AP000859.1-201ENST00000525536 307 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AC027369.5-201ENST00000533838 755 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AC105129.1-201ENST00000560250 297 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 MIR4528-201ENST00000577763 90 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AC012417.1-201ENST00000582307 1039 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 MIR548Y-201ENST00000582739 110 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AC011477.5-201ENST00000586571 259 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 ARF4P1-201ENST00000605447 541 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AC090948.1-201ENST00000607464 549 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AC080013.4-201ENST00000607624 649 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 ZYXP1-201ENST00000617638 118 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 AC138932.5-201ENST00000617759 563 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 U3.53-201ENST00000628922 216 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 TEX21P-201ENST00000447107 1476 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 UGT2B26P-201ENST00000508672 1613 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 ASNSP1-204ENST00000641977 1664 ntBASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A3Q8N4M1 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AC093311.1-201ENST00000506586 2021 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AL079343.1-201ENST00000572358 1771 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 SNORA71.2-201ENST00000364941 134 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 RPS3AP24-201ENST00000407896 734 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 RNU2-42P-201ENST00000410697 113 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 OR51A3P-201ENST00000413596 924 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 RPL7AP25-201ENST00000423357 805 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 RPS29P17-201ENST00000430795 166 ntBASIC4.84□□□□□ -1.63
SLC44A3Q8N4M1 AL451139.1-201ENST00000434718 346 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms