Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AC073850.1-201ENST00000449243 255 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AC107399.1-201ENST00000451226 265 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 HIGD1AP8-201ENST00000453927 274 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AC083904.1-201ENST00000487828 231 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AC068781.1-201ENST00000488231 618 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 Y_RNA.668-201ENST00000516233 93 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 RN7SKP99-201ENST00000517028 307 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AC053481.3-201ENST00000577881 843 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AC006115.2-201ENST00000596823 202 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AC100812.1-201ENST00000607622 580 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 BX664608.1-201ENST00000610519 487 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 ASNSP3-201ENST00000451989 1306 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 MIR133B-201ENST00000362210 119 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 RNU6-169P-201ENST00000365336 107 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 RNU6-996P-201ENST00000365438 107 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 Y_RNA.552-201ENST00000384665 112 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 MIR548K-201ENST00000408406 116 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 MIR1303-201ENST00000408625 86 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 RPL31P12-201ENST00000422587 358 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 HMGB3P10-201ENST00000434734 572 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AL138787.1-202ENST00000437804 898 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 RSU1P2-202ENST00000437884 485 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 UBE2V1P5-201ENST00000440070 405 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AC092809.1-201ENST00000441469 474 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 RPL31P44-201ENST00000447680 377 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AL356010.1-201ENST00000456364 102 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 Y_RNA.653-201ENST00000459091 95 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 RPL7P15-201ENST00000461190 712 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 RPS18P6-201ENST00000476880 458 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 DUTP1-201ENST00000493631 470 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AC096754.1-201ENST00000508904 818 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 SNORA25.10-201ENST00000515926 124 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 Y_RNA.682-201ENST00000516457 100 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 HMGB1P23-201ENST00000518743 568 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 HIGD1AP5-201ENST00000529959 259 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AL137100.2-201ENST00000555786 315 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 NCAPGP2-201ENST00000557911 754 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 MIR4436B2-201ENST00000581415 91 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 MIR4436B1-201ENST00000583272 91 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 MIR6820-201ENST00000611508 62 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AC068870.3-201ENST00000625077 2536 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 ZNF402P-201ENST00000404435 3100 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 ZNF101P1-201ENST00000435701 1720 ntBASIC7.12□□□□□ -1.27
RC3H1Q5TC82 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RC3H1Q5TC82 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms