Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.07□□□□□ -1.92
VBP1P61758 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
VBP1P61758 AL356274.2-201ENST00000624379 3752 ntBASIC3.06□□□□□ -1.92
VBP1P61758 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.06□□□□□ -1.92
VBP1P61758 RLIMP1-201ENST00000339626 1680 ntBASIC3.06□□□□□ -1.92
VBP1P61758 U3.6-201ENST00000363622 211 ntBASIC3.06□□□□□ -1.92
VBP1P61758 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.06□□□□□ -1.92
VBP1P61758 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VBP1P61758 BTF3P9-201ENST00000418784 283 ntBASIC3.06□□□□□ -1.92
VBP1P61758 AC023128.2-201ENST00000420880 1223 ntBASIC3.06□□□□□ -1.92
VBP1P61758 AC245054.1-201ENST00000420944 258 ntBASIC3.06□□□□□ -1.92
VBP1P61758 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.06□□□□□ -1.92
VBP1P61758 AC233728.2-201ENST00000425348 757 ntBASIC3.06□□□□□ -1.92
VBP1P61758 AC002069.1-201ENST00000429649 1159 ntBASIC3.06□□□□□ -1.92
VBP1P61758 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.06□□□□□ -1.92
VBP1P61758 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.06□□□□□ -1.92
VBP1P61758 MTCYBP12-201ENST00000440559 1134 ntBASIC3.06□□□□□ -1.92
VBP1P61758 AC008264.1-201ENST00000447612 367 ntBASIC3.06□□□□□ -1.92
VBP1P61758 HMGB1P26-201ENST00000452520 628 ntBASIC3.06□□□□□ -1.92
VBP1P61758 RN7SL75P-201ENST00000461926 281 ntBASIC3.06□□□□□ -1.92
VBP1P61758 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.06□□□□□ -1.92
VBP1P61758 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VBP1P61758 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.06□□□□□ -1.92
VBP1P61758 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.06□□□□□ -1.92
VBP1P61758 HIGD1AP3-201ENST00000515857 278 ntBASIC3.06□□□□□ -1.92
VBP1P61758 RNU6-352P-201ENST00000516908 107 ntBASIC3.06□□□□□ -1.92
VBP1P61758 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.06□□□□□ -1.92
VBP1P61758 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.06□□□□□ -1.92
VBP1P61758 AP004371.1-201ENST00000525240 214 ntBASIC3.06□□□□□ -1.92
VBP1P61758 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.06□□□□□ -1.92
VBP1P61758 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.06□□□□□ -1.92
VBP1P61758 MIR4480-201ENST00000582492 71 ntBASIC3.06□□□□□ -1.92
VBP1P61758 AP000676.4-201ENST00000624659 623 ntBASIC3.06□□□□□ -1.92
VBP1P61758 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VBP1P61758 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.06□□□□□ -1.92
VBP1P61758 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
VBP1P61758 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
VBP1P61758 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.05□□□□□ -1.92
VBP1P61758 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.05□□□□□ -1.92
VBP1P61758 AC093010.3-201ENST00000570269 15214 ntBASIC3.05□□□□□ -1.92
VBP1P61758 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
VBP1P61758 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
VBP1P61758 RPL21P75-201ENST00000396599 483 ntBASIC3.05□□□□□ -1.92
VBP1P61758 RPL21P28-201ENST00000401418 483 ntBASIC3.05□□□□□ -1.92
VBP1P61758 AL592114.1-201ENST00000403842 483 ntBASIC3.05□□□□□ -1.92
VBP1P61758 MIR1178-201ENST00000408396 91 ntBASIC3.05□□□□□ -1.92
VBP1P61758 RNU4-65P-201ENST00000410473 140 ntBASIC3.05□□□□□ -1.92
VBP1P61758 RNA5SP344-201ENST00000411081 104 ntBASIC3.05□□□□□ -1.92
VBP1P61758 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.05□□□□□ -1.92
VBP1P61758 AL139281.1-201ENST00000422120 335 ntBASIC3.05□□□□□ -1.92
VBP1P61758 USP9YP36-201ENST00000424581 829 ntBASIC3.05□□□□□ -1.92
VBP1P61758 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.05□□□□□ -1.92
VBP1P61758 ETF1P3-201ENST00000430422 1160 ntBASIC3.05□□□□□ -1.92
VBP1P61758 AC109583.1-201ENST00000432156 268 ntBASIC3.05□□□□□ -1.92
VBP1P61758 Z99714.1-201ENST00000450463 807 ntBASIC3.05□□□□□ -1.92
VBP1P61758 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.05□□□□□ -1.92
VBP1P61758 RPL21P39-201ENST00000463605 483 ntBASIC3.05□□□□□ -1.92
VBP1P61758 AC011979.1-201ENST00000472300 483 ntBASIC3.05□□□□□ -1.92
VBP1P61758 AC023598.1-201ENST00000472521 361 ntBASIC3.05□□□□□ -1.92
VBP1P61758 RPL21P93-201ENST00000480465 489 ntBASIC3.05□□□□□ -1.92
VBP1P61758 AC233702.1-201ENST00000482905 502 ntBASIC3.05□□□□□ -1.92
VBP1P61758 AC087190.1-201ENST00000484462 480 ntBASIC3.05□□□□□ -1.92
VBP1P61758 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.05□□□□□ -1.92
VBP1P61758 AC093591.1-201ENST00000491435 481 ntBASIC3.05□□□□□ -1.92
VBP1P61758 RPL21P129-201ENST00000491732 478 ntBASIC3.05□□□□□ -1.92
VBP1P61758 RPL21P16-201ENST00000495531 483 ntBASIC3.05□□□□□ -1.92
VBP1P61758 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.05□□□□□ -1.92
VBP1P61758 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.05□□□□□ -1.92
VBP1P61758 AC034244.2-201ENST00000514668 858 ntBASIC3.05□□□□□ -1.92
VBP1P61758 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VBP1P61758 RNA5SP217-201ENST00000515959 91 ntBASIC3.05□□□□□ -1.92
VBP1P61758 RNU6-1004P-201ENST00000516584 111 ntBASIC3.05□□□□□ -1.92
VBP1P61758 MTND2P26-201ENST00000528255 1029 ntBASIC3.05□□□□□ -1.92
VBP1P61758 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
VBP1P61758 AC120057.2-201ENST00000571520 271 ntBASIC3.05□□□□□ -1.92
VBP1P61758 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.05□□□□□ -1.92
VBP1P61758 MIR548Y-201ENST00000582739 110 ntBASIC3.05□□□□□ -1.92
VBP1P61758 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.05□□□□□ -1.92
VBP1P61758 DUXAP4-201ENST00000603046 613 ntBASIC3.05□□□□□ -1.92
VBP1P61758 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.05□□□□□ -1.92
VBP1P61758 RNU4-89P-201ENST00000607443 133 ntBASIC3.05□□□□□ -1.92
VBP1P61758 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.05□□□□□ -1.92
VBP1P61758 MIR7155-201ENST00000615925 56 ntBASIC3.05□□□□□ -1.92
VBP1P61758 U73479.1-201ENST00000618062 168 ntBASIC3.05□□□□□ -1.92
VBP1P61758 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VBP1P61758 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.05□□□□□ -1.92
VBP1P61758 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.05□□□□□ -1.92
VBP1P61758 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VBP1P61758 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.05□□□□□ -1.92
VBP1P61758 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
VBP1P61758 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.05□□□□□ -1.92
VBP1P61758 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
VBP1P61758 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.04□□□□□ -1.92
VBP1P61758 AC032011.1-201ENST00000611703 1549 ntBASIC3.04□□□□□ -1.92
VBP1P61758 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VBP1P61758 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VBP1P61758 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
VBP1P61758 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.04□□□□□ -1.92
VBP1P61758 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VBP1P61758 METTL21EP-201ENST00000298105 713 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms