Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC005832.2-201ENST00000538921 1430 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC6A4P31645 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC6A4P31645 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SLC6A4P31645 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SLC6A4P31645 MIR298-201ENST00000401212 88 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 ARL4AP5-201ENST00000404372 599 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC6A4P31645 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.89□□□□□ -1.63
SLC6A4P31645 NPM1P24-201ENST00000428039 894 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC6A4P31645 AC092013.1-201ENST00000438795 332 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 AC092427.1-201ENST00000439177 601 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC6A4P31645 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC6A4P31645 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC6A4P31645 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC6A4P31645 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC6A4P31645 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC6A4P31645 AC097493.1-201ENST00000463958 372 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 AL672167.3-201ENST00000465951 960 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.89□□□□□ -1.63
SLC6A4P31645 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC6A4P31645 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC6A4P31645 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC6A4P31645 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC6A4P31645 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC6A4P31645 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.89□□□□□ -1.63
SLC6A4P31645 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC6A4P31645 OR5AN2P-201ENST00000534535 896 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC6A4P31645 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC6A4P31645 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
SLC6A4P31645 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC6A4P31645 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC6A4P31645 AC087481.2-201ENST00000565492 330 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC6A4P31645 CYCSP40-201ENST00000575927 294 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 MTND1P15-201ENST00000579262 949 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 AC005771.1-201ENST00000585581 349 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC6A4P31645 AC138749.5-201ENST00000611461 208 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 AC008498.1-201ENST00000613012 531 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 AC138932.5-201ENST00000617759 563 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 AP000346.3-201ENST00000622821 210 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 AL160394.1-201ENST00000624765 724 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 OR2L1P-202ENST00000641567 1023 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SLC6A4P31645 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC6A4P31645 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC6A4P31645 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC6A4P31645 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC6A4P31645 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC6A4P31645 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC6A4P31645 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC6A4P31645 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC6A4P31645 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC6A4P31645 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC6A4P31645 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SLC6A4P31645 Y_RNA.516-201ENST00000384541 124 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 MIR92A2-201ENST00000385299 75 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SLC6A4P31645 RPS16P5-201ENST00000406501 404 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SLC6A4P31645 RNU2-66P-201ENST00000410650 161 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AL591848.1-201ENST00000413092 322 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 HMGB1P11-201ENST00000413899 637 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AC069213.2-201ENST00000420238 366 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 E2F6P2-201ENST00000420708 748 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 RPS27AP14-201ENST00000422868 454 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 SDCBPP2-201ENST00000424643 885 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AC009965.2-201ENST00000425328 970 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AC010975.2-201ENST00000427781 588 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 ZYG11AP1-201ENST00000430329 837 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AC091390.1-201ENST00000433904 331 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AC091862.1-201ENST00000438016 1100 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SLC6A4P31645 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC6A4P31645 AC239367.2-201ENST00000447309 705 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC6A4P31645 TPT1P12-201ENST00000448968 492 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AC243772.1-201ENST00000451620 410 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 TRGVB-201ENST00000453257 471 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 TPT1P7-201ENST00000458300 517 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC6A4P31645 AC010301.1-201ENST00000473936 355 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AP000797.1-201ENST00000478870 387 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AC090686.1-201ENST00000481577 749 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AC021678.1-201ENST00000505195 936 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC6A4P31645 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC6A4P31645 KRT19P6-201ENST00000510983 209 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC6A4P31645 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC6A4P31645 RNU6-347P-201ENST00000516658 105 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SLC6A4P31645 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms