Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AL031274.2-201ENST00000599419 203 ntBASIC1.34□□□□□ -2.19
MACF1Q9UPN3 MIR6515-201ENST00000619843 57 ntBASIC1.34□□□□□ -2.19
MACF1Q9UPN3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.34□□□□□ -2.19
MACF1Q9UPN3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
MACF1Q9UPN3 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.34□□□□□ -2.2
MACF1Q9UPN3 RNY3-201ENST00000365484 102 ntBASIC1.34□□□□□ -2.2
MACF1Q9UPN3 SNORA3.2-201ENST00000408221 125 ntBASIC1.34□□□□□ -2.2
MACF1Q9UPN3 AC004552.1-201ENST00000419089 348 ntBASIC1.34□□□□□ -2.2
MACF1Q9UPN3 HMGN2P3-201ENST00000433603 273 ntBASIC1.34□□□□□ -2.2
MACF1Q9UPN3 HMGN2P5-201ENST00000436882 273 ntBASIC1.34□□□□□ -2.2
MACF1Q9UPN3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 AL139109.1-201ENST00000455491 297 ntBASIC1.34□□□□□ -2.2
MACF1Q9UPN3 AC004057.1-201ENST00000485827 348 ntBASIC1.34□□□□□ -2.2
MACF1Q9UPN3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 RPL23AP73-201ENST00000492507 471 ntBASIC1.34□□□□□ -2.2
MACF1Q9UPN3 RNA5SP490-201ENST00000517141 136 ntBASIC1.34□□□□□ -2.2
MACF1Q9UPN3 YWHAZP1-201ENST00000556286 722 ntBASIC1.34□□□□□ -2.2
MACF1Q9UPN3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 SAGE2P-201ENST00000420011 2126 ntBASIC1.34□□□□□ -2.2
MACF1Q9UPN3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
MACF1Q9UPN3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 RNA5SP424-201ENST00000390988 115 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 RNA5SP213-201ENST00000391031 106 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AP000867.2-201ENST00000532468 320 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 RPL21P5-201ENST00000554662 472 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 Z95331.1-201ENST00000623075 23112 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 RNU6-105P-201ENST00000363909 104 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 HMGB1P10-201ENST00000395823 563 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AC073587.1-201ENST00000447093 876 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AL049874.2-201ENST00000492636 288 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 TMEM248P1-201ENST00000510579 951 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 RN7SKP46-201ENST00000515942 234 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AL133271.1-201ENST00000538229 291 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AC240504.1-201ENST00000395709 845 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 RNU4-26P-201ENST00000410270 107 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AC099506.2-201ENST00000623074 221 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 NDUFB1P1-201ENST00000435191 180 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 ST13P20-201ENST00000447996 1065 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AC106785.3-201ENST00000564064 847 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AC104237.2-201ENST00000612456 443 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 AC007390.2-201ENST00000606229 3803 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
MACF1Q9UPN3 U3.39-201ENST00000408569 239 ntBASIC1.33□□□□□ -2.2
MACF1Q9UPN3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms