Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC3.25□□□□□ -1.89
BRCA2P51587 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BRCA2P51587 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
BRCA2P51587 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BRCA2P51587 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
BRCA2P51587 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BRCA2P51587 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
BRCA2P51587 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BRCA2P51587 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.24□□□□□ -1.89
BRCA2P51587 SNORA9.2-201ENST00000365361 133 ntBASIC3.24□□□□□ -1.89
BRCA2P51587 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.24□□□□□ -1.89
BRCA2P51587 VTA1P1-201ENST00000414044 866 ntBASIC3.24□□□□□ -1.89
BRCA2P51587 DUTP6-201ENST00000425573 462 ntBASIC3.24□□□□□ -1.89
BRCA2P51587 AC107934.2-201ENST00000518653 310 ntBASIC3.24□□□□□ -1.89
BRCA2P51587 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.24□□□□□ -1.89
BRCA2P51587 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.24□□□□□ -1.89
BRCA2P51587 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
BRCA2P51587 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC3.24□□□□□ -1.89
BRCA2P51587 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
BRCA2P51587 Y_RNA.164-201ENST00000363709 102 ntBASIC3.24□□□□□ -1.89
BRCA2P51587 HSPE1P8-201ENST00000406997 288 ntBASIC3.24□□□□□ -1.89
BRCA2P51587 U3.42-201ENST00000408746 214 ntBASIC3.24□□□□□ -1.89
BRCA2P51587 AC015917.1-201ENST00000579654 510 ntBASIC3.24□□□□□ -1.89
BRCA2P51587 AL158062.1-201ENST00000619632 745 ntBASIC3.24□□□□□ -1.89
BRCA2P51587 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
BRCA2P51587 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
BRCA2P51587 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
BRCA2P51587 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
BRCA2P51587 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
BRCA2P51587 Z95331.1-201ENST00000623075 23112 ntBASIC3.24□□□□□ -1.89
BRCA2P51587 Y_RNA.796-201ENST00000364268 102 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 Y_RNA.799-201ENST00000364992 102 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 RN7SKP223-201ENST00000410582 62 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 NPM1P24-201ENST00000428039 894 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 GAPDHP39-201ENST00000481866 979 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 MIR4648-201ENST00000580107 72 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
BRCA2P51587 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
BRCA2P51587 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRCA2P51587 MAPK10-320ENST00000641462 6696 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.23□□□□□ -1.89
BRCA2P51587 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.23□□□□□ -1.89
BRCA2P51587 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRCA2P51587 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRCA2P51587 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.23□□□□□ -1.89
BRCA2P51587 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.23□□□□□ -1.89
BRCA2P51587 AC124916.1-201ENST00000444020 547 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 SEPT14P1-201ENST00000458703 648 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 AC069499.1-201ENST00000489433 509 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
BRCA2P51587 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRCA2P51587 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
BRCA2P51587 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.23□□□□□ -1.89
BRCA2P51587 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRCA2P51587 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BRCA2P51587 HMGN2P3-201ENST00000433603 273 ntBASIC3.22□□□□□ -1.89
BRCA2P51587 HMGN2P5-201ENST00000436882 273 ntBASIC3.22□□□□□ -1.89
BRCA2P51587 TRBV8-2-201ENST00000475637 270 ntBASIC3.22□□□□□ -1.89
BRCA2P51587 AC111000.2-201ENST00000507775 550 ntBASIC3.22□□□□□ -1.89
BRCA2P51587 AP001646.1-201ENST00000527936 915 ntBASIC3.22□□□□□ -1.89
BRCA2P51587 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.22□□□□□ -1.89
BRCA2P51587 DNAJC19P3-201ENST00000594491 331 ntBASIC3.22□□□□□ -1.89
BRCA2P51587 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.22□□□□□ -1.89
BRCA2P51587 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.22□□□□□ -1.89
BRCA2P51587 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC3.22□□□□□ -1.89
BRCA2P51587 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.22□□□□□ -1.89
BRCA2P51587 AC012123.2-201ENST00000485809 248 ntBASIC3.22□□□□□ -1.89
BRCA2P51587 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.22□□□□□ -1.89
BRCA2P51587 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
BRCA2P51587 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BRCA2P51587 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BRCA2P51587 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BRCA2P51587 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BRCA2P51587 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BRCA2P51587 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BRCA2P51587 RN7SKP192-201ENST00000411291 327 ntBASIC3.22□□□□□ -1.89
BRCA2P51587 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.22□□□□□ -1.89
BRCA2P51587 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BRCA2P51587 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.22□□□□□ -1.89
BRCA2P51587 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.22□□□□□ -1.89
BRCA2P51587 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.22□□□□□ -1.89
BRCA2P51587 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC3.22□□□□□ -1.89
BRCA2P51587 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BRCA2P51587 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
BRCA2P51587 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC3.21□□□□□ -1.9
BRCA2P51587 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
BRCA2P51587 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC3.21□□□□□ -1.9
BRCA2P51587 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BRCA2P51587 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.21□□□□□ -1.9
BRCA2P51587 AC008638.3-201ENST00000603341 463 ntBASIC3.21□□□□□ -1.9
BRCA2P51587 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BRCA2P51587 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
BRCA2P51587 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
BRCA2P51587 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BRCA2P51587 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.21□□□□□ -1.9
BRCA2P51587 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.21□□□□□ -1.9
BRCA2P51587 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC3.21□□□□□ -1.9
BRCA2P51587 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms