Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 KCNH5-204ENST00000420622 2711 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXD11P31277 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
HOXD11P31277 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
HOXD11P31277 RNU6-508P-201ENST00000363231 103 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXD11P31277 Y_RNA.456-201ENST00000384232 111 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 RNU6-72P-201ENST00000384285 79 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 MIR570-201ENST00000384917 97 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 AL031003.1-201ENST00000404229 172 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 AL590004.2-201ENST00000404787 371 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC8.44□□□□□ -1.06
HOXD11P31277 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC8.44□□□□□ -1.06
HOXD11P31277 RPL39P40-201ENST00000445481 146 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 AC006026.2-201ENST00000457376 180 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 RN7SL189P-201ENST00000468631 289 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 AC083906.1-201ENST00000509298 406 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 MTND6P19-201ENST00000519399 524 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.44□□□□□ -1.06
HOXD11P31277 MIR4269-201ENST00000578705 84 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 MIR4642-201ENST00000583943 82 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 AC006453.3-201ENST00000635891 377 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 AC243725.1-201ENST00000637164 436 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXD11P31277 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXD11P31277 EZH1-205ENST00000585893 2394 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXD11P31277 EZH1-217ENST00000590078 2392 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXD11P31277 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXD11P31277 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXD11P31277 COA7-201ENST00000371538 4005 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXD11P31277 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.44□□□□□ -1.06
HOXD11P31277 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
HOXD11P31277 ABCB1-201ENST00000265724 4645 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXD11P31277 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXD11P31277 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXD11P31277 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
HOXD11P31277 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXD11P31277 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXD11P31277 CAMSAP2-203ENST00000413307 4498 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXD11P31277 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXD11P31277 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC8.43□□□□□ -1.06
HOXD11P31277 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXD11P31277 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC8.43□□□□□ -1.06
HOXD11P31277 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
HOXD11P31277 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC8.43□□□□□ -1.06
HOXD11P31277 AL589743.1-201ENST00000551932 2712 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXD11P31277 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXD11P31277 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
HOXD11P31277 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
HOXD11P31277 RNU6-1125P-201ENST00000363601 107 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 Y_RNA.593-201ENST00000410292 98 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 RNU6-383P-201ENST00000410864 94 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 AC064862.5-201ENST00000440618 334 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 FABP5P15-201ENST00000453566 214 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 SNRPGP8-201ENST00000454064 226 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 RPL21P10-201ENST00000463521 490 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 RN7SL146P-201ENST00000472338 297 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 RN7SL58P-201ENST00000473445 294 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 RNU6-572P-201ENST00000516724 80 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC8.43□□□□□ -1.06
HOXD11P31277 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC8.43□□□□□ -1.06
HOXD11P31277 OR4N1P-201ENST00000554847 949 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.43□□□□□ -1.06
HOXD11P31277 FAM30C-201ENST00000561158 410 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 AC092114.1-201ENST00000567227 532 ntTSL 4 BASIC8.43□□□□□ -1.06
HOXD11P31277 MIR5571-201ENST00000577998 113 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 MIR3714-201ENST00000579507 65 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 AC087393.3-201ENST00000584971 166 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 AC068768.2-201ENST00000602352 343 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 FAM71BP1-201ENST00000604431 523 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 AL356157.2-201ENST00000605122 111 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 RMST_8.1-201ENST00000610287 165 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 MIR6127-201ENST00000614019 109 ntBASIC8.43□□□□□ -1.06
HOXD11P31277 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXD11P31277 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC8.43□□□□□ -1.06
HOXD11P31277 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXD11P31277 CCDC113-201ENST00000219299 5272 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXD11P31277 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC8.43□□□□□ -1.06
HOXD11P31277 PXYLP1-207ENST00000508812 4158 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
HOXD11P31277 LARS2-201ENST00000265537 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXD11P31277 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
HOXD11P31277 USP4-202ENST00000351842 3222 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC8.42□□□□□ -1.06
HOXD11P31277 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC8.42□□□□□ -1.06
HOXD11P31277 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 PNPT1P1-201ENST00000450418 2315 ntBASIC8.42□□□□□ -1.06
HOXD11P31277 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
HOXD11P31277 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
HOXD11P31277 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
HOXD11P31277 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 PGAM1P3-201ENST00000420790 565 ntBASIC8.42□□□□□ -1.06
HOXD11P31277 AL662874.1-201ENST00000426065 230 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms