Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ALDH1A1P00352 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
ALDH1A1P00352 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.86□□□□□ -1.31
ALDH1A1P00352 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.86□□□□□ -1.31
ALDH1A1P00352 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ALDH1A1P00352 AC097504.1-201ENST00000515103 2415 ntBASIC6.86□□□□□ -1.31
ALDH1A1P00352 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ALDH1A1P00352 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ALDH1A1P00352 AL662795.2-201ENST00000624252 3706 ntBASIC6.86□□□□□ -1.31
ALDH1A1P00352 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
ALDH1A1P00352 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
ALDH1A1P00352 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ALDH1A1P00352 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 AC007938.2-201ENST00000604666 2634 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 AC009120.2-204ENST00000621548 2032 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 AL512646.1-201ENST00000269395 1077 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 RNU6-666P-201ENST00000363499 107 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 Y_RNA.291-201ENST00000364886 113 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 RNU4-48P-201ENST00000365559 182 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 RNU4-2-201ENST00000365668 141 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 RNA5SP498-201ENST00000411342 120 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 RAC1P6-201ENST00000423911 575 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 AC113412.1-201ENST00000425840 504 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 OR2AS1P-201ENST00000427827 319 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 MTCO3P45-201ENST00000443036 613 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 RPL23AP60-201ENST00000450011 454 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 AC108161.1-201ENST00000461060 402 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 AL355032.1-201ENST00000472981 438 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 AC126389.1-201ENST00000477436 290 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 AC092451.1-201ENST00000480211 153 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 SNORD27.1-201ENST00000516319 72 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 MIR5186-201ENST00000577504 120 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 RN7SL708P-201ENST00000580952 299 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 AL049539.1-201ENST00000611964 459 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 PLCE1P1-201ENST00000622094 305 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 RAD17P2-201ENST00000451754 1977 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 AC016251.2-201ENST00000623393 3089 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 AC016583.1-201ENST00000624221 2431 ntBASIC6.85□□□□□ -1.31
ALDH1A1P00352 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ALDH1A1P00352 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.85□□□□□ -1.31
ALDH1A1P00352 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ALDH1A1P00352 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ALDH1A1P00352 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 RNU6-657P-201ENST00000383904 107 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 RNU6-532P-201ENST00000384318 107 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 RNU6-952P-201ENST00000391164 108 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 RNA5SP345-201ENST00000410646 108 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 HMGB1P9-201ENST00000429856 646 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 RPS7P3-201ENST00000443360 580 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 AC021074.2-201ENST00000468434 172 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 AC092824.1-201ENST00000483524 576 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ALDH1A1P00352 RNU6-1213P-201ENST00000517075 94 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 RNA5SP454-201ENST00000517231 127 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 HIGD1AP6-201ENST00000521833 279 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 AP001804.2-201ENST00000533932 910 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 AC090502.2-201ENST00000549267 280 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 AL049779.2-201ENST00000553847 315 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 AC096996.1-201ENST00000563813 325 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.84□□□□□ -1.31
ALDH1A1P00352 AC145423.1-201ENST00000605712 336 ntBASIC6.84□□□□□ -1.31
ALDH1A1P00352 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms