Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 YWHAQP7-201ENST00000603536 658 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AC068313.1-201ENST00000604028 1008 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AL139344.1-201ENST00000605228 195 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AC020634.1-201ENST00000608701 549 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AC245297.2-201ENST00000610119 565 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AL139418.1-201ENST00000613613 177 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 uc_338.18-201ENST00000615451 175 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AC091304.6-201ENST00000619761 202 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 MIR7703-201ENST00000620784 77 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AC067852.7-201ENST00000623270 535 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AC007546.2-201ENST00000623996 360 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-2O95096 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX2-2O95096 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-2O95096 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-2O95096 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX2-2O95096 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
NKX2-2O95096 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-2O95096 MFSD8-216ENST00000641147 4009 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-2O95096 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
NKX2-2O95096 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-2O95096 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-2O95096 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NKX2-2O95096 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
NKX2-2O95096 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-2O95096 AC103591.2-201ENST00000265259 766 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-2O95096 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NKX2-2O95096 RPS3AP23-201ENST00000401762 784 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-2O95096 RPS16P5-201ENST00000406501 404 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 RAP1BP1-201ENST00000412709 553 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 OR8G2P-201ENST00000412796 908 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-2O95096 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-2O95096 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-2O95096 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-2O95096 RPL7AP25-201ENST00000423357 805 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 NIPA2P1-201ENST00000426223 976 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AC092427.1-201ENST00000439177 601 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX2-2O95096 RPL26P28-201ENST00000451325 435 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-2O95096 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-2O95096 RPS27AP17-201ENST00000463344 455 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AC053481.1-201ENST00000467217 306 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AP000563.1-201ENST00000490865 758 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-2O95096 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-2O95096 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-2O95096 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-2O95096 AC021146.3-201ENST00000511911 260 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-2O95096 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 RNU6-583P-201ENST00000516012 92 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 OR5AK1P-201ENST00000524837 922 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AP000926.4-201ENST00000527351 454 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-2O95096 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-2O95096 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-2O95096 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-2O95096 PDCD5P1-201ENST00000543528 309 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AL512347.1-201ENST00000566420 503 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.12□□□□□ -1.75
NKX2-2O95096 AC005412.1-201ENST00000580812 1049 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-2O95096 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX2-2O95096 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX2-2O95096 AC005962.2-201ENST00000611427 652 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AC099669.2-201ENST00000616549 437 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AP005019.3-201ENST00000620418 560 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 AC131159.1-201ENST00000621854 213 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 BMS1P21-201ENST00000634565 365 ntBASIC4.12□□□□□ -1.75
NKX2-2O95096 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.12□□□□□ -1.75
NKX2-2O95096 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-2O95096 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-2O95096 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX2-2O95096 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-2O95096 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NKX2-2O95096 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX2-2O95096 AC105074.1-201ENST00000623380 3095 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 SGO1P2-201ENST00000429458 1589 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NKX2-2O95096 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-2O95096 RAD17P1-201ENST00000418130 2042 ntBASIC4.11□□□□□ -1.75
NKX2-2O95096 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NKX2-2O95096 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms