Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.91□□□□□ -1.78
COL1A1P02452 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
COL1A1P02452 MIR30E-201ENST00000362104 92 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.91□□□□□ -1.78
COL1A1P02452 SNORA7.4-201ENST00000384249 137 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 RNU2-22P-201ENST00000411266 212 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 AL513174.1-201ENST00000423182 629 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 AC093698.1-201ENST00000423843 571 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 RPS26P40-201ENST00000435209 294 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL1A1P02452 HMGB1P5-202ENST00000451497 985 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL1A1P02452 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.91□□□□□ -1.78
COL1A1P02452 RN7SKP116-201ENST00000516902 319 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 PSMA2P1-201ENST00000526365 646 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.91□□□□□ -1.78
COL1A1P02452 CR383656.14-201ENST00000551951 406 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 uc_338.25-201ENST00000613756 156 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 SRP72P2-201ENST00000344851 1979 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 AL031985.3-201ENST00000565390 2449 ntBASIC3.9□□□□□ -1.78
COL1A1P02452 MTCO1P22-201ENST00000604619 1360 ntBASIC3.9□□□□□ -1.78
COL1A1P02452 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COL1A1P02452 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL1A1P02452 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COL1A1P02452 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL1A1P02452 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COL1A1P02452 TTC39DP-201ENST00000416781 1688 ntBASIC3.9□□□□□ -1.78
COL1A1P02452 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.9□□□□□ -1.79
COL1A1P02452 RNA5SP126-201ENST00000365092 109 ntBASIC3.9□□□□□ -1.79
COL1A1P02452 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL1A1P02452 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
COL1A1P02452 Z98941.1-201ENST00000407764 100 ntBASIC3.9□□□□□ -1.79
COL1A1P02452 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COL1A1P02452 AC012065.2-201ENST00000421295 375 ntBASIC3.9□□□□□ -1.79
COL1A1P02452 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.9□□□□□ -1.79
COL1A1P02452 AC025750.2-201ENST00000442609 450 ntBASIC3.9□□□□□ -1.79
COL1A1P02452 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.9□□□□□ -1.79
COL1A1P02452 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.9□□□□□ -1.79
COL1A1P02452 RPL7P48-201ENST00000461513 746 ntBASIC3.9□□□□□ -1.79
COL1A1P02452 AC010486.1-201ENST00000511793 424 ntBASIC3.9□□□□□ -1.79
COL1A1P02452 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.9□□□□□ -1.79
COL1A1P02452 AC006023.1-201ENST00000603944 259 ntBASIC3.9□□□□□ -1.79
COL1A1P02452 RMST_8.1-201ENST00000610287 165 ntBASIC3.9□□□□□ -1.79
COL1A1P02452 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.9□□□□□ -1.79
COL1A1P02452 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COL1A1P02452 AC017071.1-201ENST00000564407 2204 ntBASIC3.9□□□□□ -1.79
COL1A1P02452 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.9□□□□□ -1.79
COL1A1P02452 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL1A1P02452 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL1A1P02452 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
COL1A1P02452 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL1A1P02452 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL1A1P02452 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
COL1A1P02452 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.89□□□□□ -1.79
COL1A1P02452 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.89□□□□□ -1.79
COL1A1P02452 AC140076.1-201ENST00000449897 361 ntBASIC3.89□□□□□ -1.79
COL1A1P02452 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.89□□□□□ -1.79
COL1A1P02452 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL1A1P02452 AP002404.1-201ENST00000532005 451 ntBASIC3.89□□□□□ -1.79
COL1A1P02452 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.89□□□□□ -1.79
COL1A1P02452 AC015917.1-201ENST00000579654 510 ntBASIC3.89□□□□□ -1.79
COL1A1P02452 UBL5P2-201ENST00000583788 219 ntBASIC3.89□□□□□ -1.79
COL1A1P02452 AC005242.1-201ENST00000585658 438 ntBASIC3.89□□□□□ -1.79
COL1A1P02452 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.89□□□□□ -1.79
COL1A1P02452 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.89□□□□□ -1.79
COL1A1P02452 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.89□□□□□ -1.79
COL1A1P02452 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL1A1P02452 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL1A1P02452 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL1A1P02452 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
COL1A1P02452 AC007899.1-201ENST00000412776 775 ntBASIC3.88□□□□□ -1.79
COL1A1P02452 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.88□□□□□ -1.79
COL1A1P02452 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.88□□□□□ -1.79
COL1A1P02452 FGF7P3-201ENST00000454645 303 ntBASIC3.88□□□□□ -1.79
COL1A1P02452 RPL23AP67-201ENST00000465341 474 ntBASIC3.88□□□□□ -1.79
COL1A1P02452 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
COL1A1P02452 AC021146.1-201ENST00000511202 716 ntBASIC3.88□□□□□ -1.79
COL1A1P02452 AC008885.1-201ENST00000514930 301 ntBASIC3.88□□□□□ -1.79
COL1A1P02452 RNU6-964P-201ENST00000516524 69 ntBASIC3.88□□□□□ -1.79
COL1A1P02452 IGLVIV-53-201ENST00000520107 367 ntBASIC3.88□□□□□ -1.79
COL1A1P02452 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.88□□□□□ -1.79
COL1A1P02452 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.88□□□□□ -1.79
COL1A1P02452 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.88□□□□□ -1.79
COL1A1P02452 AL034351.1-201ENST00000605288 668 ntBASIC3.88□□□□□ -1.79
COL1A1P02452 uc_338.32-201ENST00000615087 172 ntBASIC3.88□□□□□ -1.79
COL1A1P02452 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.88□□□□□ -1.79
COL1A1P02452 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
COL1A1P02452 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL1A1P02452 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL1A1P02452 OR5BR1P-201ENST00000524992 1330 ntBASIC3.88□□□□□ -1.79
COL1A1P02452 NEAT1-202ENST00000501122 22743 ntBASIC3.88□□□□□ -1.79
COL1A1P02452 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.87□□□□□ -1.79
COL1A1P02452 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.87□□□□□ -1.79
COL1A1P02452 AC073325.2-201ENST00000339545 159 ntBASIC3.87□□□□□ -1.79
COL1A1P02452 AC008065.1-201ENST00000428525 348 ntBASIC3.87□□□□□ -1.79
COL1A1P02452 AL365396.1-201ENST00000430854 671 ntBASIC3.87□□□□□ -1.79
COL1A1P02452 AC069540.1-201ENST00000446320 988 ntBASIC3.87□□□□□ -1.79
COL1A1P02452 AC239809.1-201ENST00000450470 217 ntBASIC3.87□□□□□ -1.79
COL1A1P02452 RPS6P2-201ENST00000454208 705 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms