Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AC211433.3-201ENST00000623770 375 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.89□□□□□ -1.31
LHX6Q9UPM6 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
LHX6Q9UPM6 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AC010886.1-201ENST00000437380 2869 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 SF3A3P1-201ENST00000446317 1477 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 MFSD8-217ENST00000641178 4374 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 RNU6-923P-201ENST00000364753 107 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 SNORA70.5-201ENST00000365519 135 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 RNU6-898P-201ENST00000365627 104 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 RNU6-933P-201ENST00000384424 107 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 Y_RNA.504-201ENST00000384481 104 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 MIR555-201ENST00000384987 96 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 RN7SKP159-201ENST00000410657 292 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 RNU2-61P-201ENST00000411069 191 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 RNU6-325P-201ENST00000411132 105 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 RNU5E-9P-201ENST00000411164 104 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 RNA5SP280-201ENST00000411230 115 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AC073063.1-201ENST00000434352 607 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 OR6D1P-201ENST00000436165 939 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 HSPD1P21-201ENST00000436541 245 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 HSPE1P25-201ENST00000455484 251 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 HMGN2P13-201ENST00000476476 274 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AC124945.1-201ENST00000485133 188 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AC233724.1-201ENST00000503894 233 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 SSX8-201ENST00000506270 579 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AC108471.1-201ENST00000513977 287 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AP006245.1-201ENST00000522549 120 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AC068790.4-201ENST00000602474 263 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 MIR3976-201ENST00000606807 139 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 AL606537.1-201ENST00000607258 2011 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 TMCC1P1-201ENST00000518897 1980 ntBASIC6.88□□□□□ -1.31
LHX6Q9UPM6 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LHX6Q9UPM6 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms