Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NF1P3-201ENST00000457709 450 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 AC079168.1-201ENST00000458741 345 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 AC090142.1-201ENST00000465776 462 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 AC098847.1-201ENST00000473094 348 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 RN7SL717P-201ENST00000478343 297 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 RN7SL561P-201ENST00000488553 281 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 AC008083.2-201ENST00000546707 476 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 TPRX1P1-201ENST00000557620 319 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 MIR3118-1-201ENST00000581787 76 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 RN7SL404P-201ENST00000582421 281 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 AL513327.3-201ENST00000602618 469 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 AC092447.9-201ENST00000603395 144 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 SOCS5P3-201ENST00000425115 1576 ntBASIC6.78□□□□□ -1.32
CTC1Q2NKJ3 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.77□□□□□ -1.32
CTC1Q2NKJ3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CTC1Q2NKJ3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CTC1Q2NKJ3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 Y_RNA.376-201ENST00000365638 108 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 Y_RNA.380-201ENST00000365663 111 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 RNU6-730P-201ENST00000383954 104 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AL606923.1-201ENST00000406616 190 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 RNU2-23P-201ENST00000410545 195 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 RPL7P4-203ENST00000430239 730 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AL133396.1-201ENST00000432048 687 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 RPS6P12-201ENST00000432491 726 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC023141.3-201ENST00000436698 278 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AL353662.1-201ENST00000439099 327 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 GAPDHP14-201ENST00000450472 937 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC011476.1-201ENST00000466725 307 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 RPL7P43-201ENST00000478876 753 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC114801.2-201ENST00000503825 781 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 SCARNA24.1-201ENST00000516465 137 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 IGHV4-55-201ENST00000520889 368 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 HSPE1P20-201ENST00000538133 289 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AP000763.2-201ENST00000540641 163 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AL118558.2-201ENST00000556294 238 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC130289.1-201ENST00000577321 73 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC068768.2-201ENST00000602352 343 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC073657.2-201ENST00000605661 303 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC091768.1-201ENST00000609258 930 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC091953.2-201ENST00000623979 160 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC046144.1-201ENST00000478559 1853 ntBASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTC1Q2NKJ3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 SNRPEP3-201ENST00000338402 276 ntBASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 Y_RNA.106-201ENST00000363189 100 ntBASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 RNU6-280P-201ENST00000364145 104 ntBASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 U3.25-201ENST00000391209 220 ntBASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 ARF4P3-201ENST00000397387 509 ntBASIC6.76□□□□□ -1.33
CTC1Q2NKJ3 AC073264.1-201ENST00000411508 416 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms