Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
DDX49Q9Y6V7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 MTDHP1-201ENST00000605323 784 ntBASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.12■■□□□ 1.29
DDX49Q9Y6V7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX49Q9Y6V7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 SNORA78-201ENST00000459373 127 ntBASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
DDX49Q9Y6V7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 KRT8P36-201ENST00000489121 1440 ntBASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 AC005829.2-201ENST00000571422 1056 ntBASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 AC120498.8-201ENST00000614275 531 ntBASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
DDX49Q9Y6V7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms