Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC104417.2-201ENST00000562989 1793 ntBASIC29.26■■■□□ 2.28
CDC42BPBQ9Y5S2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 AC092597.1-201ENST00000487352 616 ntBASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 AL512408.1-201ENST00000569378 2000 ntBASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CDC42BPBQ9Y5S2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
CDC42BPBQ9Y5S2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDC42BPBQ9Y5S2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDC42BPBQ9Y5S2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
CDC42BPBQ9Y5S2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDC42BPBQ9Y5S2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDC42BPBQ9Y5S2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
CDC42BPBQ9Y5S2 ANKRD18DP-204ENST00000455355 1975 ntBASIC29.24■■■□□ 2.27
CDC42BPBQ9Y5S2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC29.24■■■□□ 2.27
CDC42BPBQ9Y5S2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC29.24■■■□□ 2.27
CDC42BPBQ9Y5S2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC29.24■■■□□ 2.27
CDC42BPBQ9Y5S2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CDC42BPBQ9Y5S2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDC42BPBQ9Y5S2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 GPAT2P1-201ENST00000444924 1672 ntBASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
CDC42BPBQ9Y5S2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
CDC42BPBQ9Y5S2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDC42BPBQ9Y5S2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
CDC42BPBQ9Y5S2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC29.22■■■□□ 2.27
CDC42BPBQ9Y5S2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC29.22■■■□□ 2.27
CDC42BPBQ9Y5S2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC29.22■■■□□ 2.27
CDC42BPBQ9Y5S2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CDC42BPBQ9Y5S2 AC093525.10-201ENST00000625130 1569 ntBASIC29.22■■■□□ 2.27
CDC42BPBQ9Y5S2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC29.22■■■□□ 2.27
CDC42BPBQ9Y5S2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDC42BPBQ9Y5S2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
CDC42BPBQ9Y5S2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 AC092119.3-201ENST00000612618 583 ntBASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPBQ9Y5S2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 PVRIG2P-201ENST00000435460 978 ntBASIC29.2■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms