Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 KRT17P3-201ENST00000420566 1262 ntBASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 TUBB8P6-201ENST00000436895 1288 ntBASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 ZNF815P-204ENST00000434898 1737 ntBASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA11Q9Y5H2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.71■□□□□ 0.58
PCDHGA11Q9Y5H2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDHGA11Q9Y5H2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 AC026366.1-201ENST00000488803 879 ntBASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 KRT18P6-201ENST00000555540 1265 ntBASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 NEFHP1-201ENST00000412845 2629 ntBASIC18.7■□□□□ 0.58
PCDHGA11Q9Y5H2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA11Q9Y5H2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms