Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 AC098590.1-201ENST00000468126 897 ntBASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB3Q9Y5G1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 AC006557.6-201ENST00000623071 864 ntBASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 AC073648.6-201ENST00000641589 218 ntBASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHGB3Q9Y5G1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 TFP1-202ENST00000475455 1573 ntBASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB3Q9Y5G1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 AC142381.4-202ENST00000563973 229 ntBASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 AL121906.2-201ENST00000621597 723 ntBASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB3Q9Y5G1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGB3Q9Y5G1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGB3Q9Y5G1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGB3Q9Y5G1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGB3Q9Y5G1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGB3Q9Y5G1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHGB3Q9Y5G1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms