Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGC4Q9Y5F7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 AC026471.5-201ENST00000615068 467 ntBASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGC4Q9Y5F7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 AL355355.2-201ENST00000442321 338 ntBASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGC4Q9Y5F7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 Z85996.1-201ENST00000494644 937 ntBASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 NUDT16P1-203ENST00000513809 620 ntBASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGC4Q9Y5F7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 AP003071.4-201ENST00000562276 1284 ntBASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 AC116562.4-201ENST00000641316 2276 ntBASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGC4Q9Y5F7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGC4Q9Y5F7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGC4Q9Y5F7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHGC4Q9Y5F7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGC4Q9Y5F7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGC4Q9Y5F7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms