Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC098590.1-201ENST00000468126 897 ntBASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.03■□□□□ 0.8
AP4E1Q9UPM8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 HTR7P1-201ENST00000538670 1336 ntBASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
AP4E1Q9UPM8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
AP4E1Q9UPM8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.02■□□□□ 0.79
AP4E1Q9UPM8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP4E1Q9UPM8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP4E1Q9UPM8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
AP4E1Q9UPM8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 AC142381.4-202ENST00000563973 229 ntBASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 AL160286.2-201ENST00000567150 934 ntBASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4E1Q9UPM8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
AP4E1Q9UPM8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
AP4E1Q9UPM8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP4E1Q9UPM8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20■□□□□ 0.79
AP4E1Q9UPM8 AC141586.3-201ENST00000562166 1838 ntBASIC20■□□□□ 0.79
AP4E1Q9UPM8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP4E1Q9UPM8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20■□□□□ 0.79
AP4E1Q9UPM8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
AP4E1Q9UPM8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20■□□□□ 0.79
AP4E1Q9UPM8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
AP4E1Q9UPM8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
AP4E1Q9UPM8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20■□□□□ 0.79
AP4E1Q9UPM8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20■□□□□ 0.79
AP4E1Q9UPM8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20■□□□□ 0.79
AP4E1Q9UPM8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
AP4E1Q9UPM8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20■□□□□ 0.79
AP4E1Q9UPM8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
AP4E1Q9UPM8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms