Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 AC010947.1-201ENST00000623454 693 ntBASIC20.43■□□□□ 0.86
CDH9Q9ULB4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH9Q9ULB4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 C2orf69P3-201ENST00000565542 1120 ntBASIC20.42■□□□□ 0.86
CDH9Q9ULB4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 AC145285.6-201ENST00000604632 637 ntBASIC20.42■□□□□ 0.86
CDH9Q9ULB4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH9Q9ULB4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 SDHAP1-207ENST00000440850 2000 ntBASIC20.41■□□□□ 0.86
CDH9Q9ULB4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CDH9Q9ULB4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 LINC01568-207ENST00000641790 1380 ntBASIC20.4■□□□□ 0.86
CDH9Q9ULB4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH9Q9ULB4 AC073130.3-201ENST00000624389 2278 ntBASIC20.39■□□□□ 0.86
CDH9Q9ULB4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDH9Q9ULB4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CDH9Q9ULB4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms