Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GTF3C4Q9UKN8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.79■□□□□ 0.92
GTF3C4Q9UKN8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GTF3C4Q9UKN8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
GTF3C4Q9UKN8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 AL355355.2-201ENST00000442321 338 ntBASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 KSR1P1-201ENST00000446298 240 ntBASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 AP003071.4-201ENST00000562276 1284 ntBASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GTF3C4Q9UKN8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 AL355075.4-201ENST00000554988 638 ntBASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GTF3C4Q9UKN8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
GTF3C4Q9UKN8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
GTF3C4Q9UKN8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GTF3C4Q9UKN8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 AC087289.5-201ENST00000586076 3175 ntBASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
GTF3C4Q9UKN8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 AL032819.2-201ENST00000624543 2162 ntBASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 KRT16P1-201ENST00000399124 1418 ntBASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GTF3C4Q9UKN8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms