Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 CROCCP3-202ENST00000420820 1947 ntBASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RABGEF1Q9UJ41 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RABGEF1Q9UJ41 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 POM121L13P-201ENST00000422362 380 ntBASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.77■□□□□ 0.76
RABGEF1Q9UJ41 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.77■□□□□ 0.75
RABGEF1Q9UJ41 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 AL161938.1-201ENST00000569833 2180 ntBASIC19.76■□□□□ 0.75
RABGEF1Q9UJ41 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 Z99916.2-201ENST00000604037 246 ntBASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms