Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 RN7SL850P-201ENST00000579959 291 ntBASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCF1Q9UBD9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 AC005521.1-201ENST00000393351 872 ntBASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 AC092865.7-201ENST00000641832 219 ntBASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCF1Q9UBD9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 TMPOP1-202ENST00000424642 1267 ntBASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 AC128688.1-201ENST00000487626 519 ntBASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 ZNF815P-204ENST00000434898 1737 ntBASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 AC104417.2-201ENST00000562989 1793 ntBASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCF1Q9UBD9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLCF1Q9UBD9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 TERF1P1-201ENST00000311003 1181 ntBASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 MIR1224-201ENST00000408193 85 ntBASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 SLC25A1P2-201ENST00000430693 912 ntBASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCF1Q9UBD9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms