Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 KRT8P8-201ENST00000434750 1448 ntBASIC20.52■□□□□ 0.88
CHD7Q9P2D1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHD7Q9P2D1 HLA-A-201ENST00000376802 1334 ntBASIC20.52■□□□□ 0.87
CHD7Q9P2D1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.52■□□□□ 0.87
CHD7Q9P2D1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.52■□□□□ 0.87
CHD7Q9P2D1 AP002414.4-201ENST00000589764 1148 ntBASIC20.52■□□□□ 0.87
CHD7Q9P2D1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.52■□□□□ 0.87
CHD7Q9P2D1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 HLA-F-220ENST00000434407 884 ntBASIC20.51■□□□□ 0.87
CHD7Q9P2D1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 KRT8P11-201ENST00000409686 1436 ntBASIC20.51■□□□□ 0.87
CHD7Q9P2D1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.51■□□□□ 0.87
CHD7Q9P2D1 KRT18P31-201ENST00000506277 1292 ntBASIC20.51■□□□□ 0.87
CHD7Q9P2D1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 RASA4DP-201ENST00000460726 1199 ntBASIC20.5■□□□□ 0.87
CHD7Q9P2D1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 AL121672.3-201ENST00000608644 468 ntBASIC20.5■□□□□ 0.87
CHD7Q9P2D1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD7Q9P2D1 AC004870.1-201ENST00000315132 882 ntBASIC20.49■□□□□ 0.87
CHD7Q9P2D1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 AL662844.1-201ENST00000546340 181 ntBASIC20.49■□□□□ 0.87
CHD7Q9P2D1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CHD7Q9P2D1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 AL691432.2-201ENST00000607222 2038 ntBASIC20.48■□□□□ 0.87
CHD7Q9P2D1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 AL117328.2-201ENST00000624617 1940 ntBASIC20.48■□□□□ 0.87
CHD7Q9P2D1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms