Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD9Q9P000 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.43■□□□□ 0.22
COMMD9Q9P000 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.43■□□□□ 0.22
COMMD9Q9P000 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
COMMD9Q9P000 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.43■□□□□ 0.22
COMMD9Q9P000 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.43■□□□□ 0.22
COMMD9Q9P000 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD9Q9P000 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD9Q9P000 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD9Q9P000 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.43■□□□□ 0.22
COMMD9Q9P000 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD9Q9P000 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.42■□□□□ 0.22
COMMD9Q9P000 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD9Q9P000 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
COMMD9Q9P000 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.41■□□□□ 0.22
COMMD9Q9P000 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 AC097381.1-201ENST00000429019 1296 ntBASIC16.41■□□□□ 0.22
COMMD9Q9P000 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 CDV3P1-201ENST00000471403 739 ntBASIC16.41■□□□□ 0.22
COMMD9Q9P000 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.41■□□□□ 0.22
COMMD9Q9P000 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.41■□□□□ 0.22
COMMD9Q9P000 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
COMMD9Q9P000 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COMMD9Q9P000 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD9Q9P000 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
COMMD9Q9P000 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 AL133373.2-201ENST00000623187 2828 ntBASIC16.4■□□□□ 0.22
COMMD9Q9P000 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.4■□□□□ 0.22
COMMD9Q9P000 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD9Q9P000 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms