Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.66■□□□□ 0.74
UBP1Q9NZI7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 AC098818.2-201ENST00000564925 2320 ntBASIC19.65■□□□□ 0.74
UBP1Q9NZI7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBP1Q9NZI7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
UBP1Q9NZI7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBP1Q9NZI7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBP1Q9NZI7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
UBP1Q9NZI7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBP1Q9NZI7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBP1Q9NZI7 AP000974.1-201ENST00000623909 2387 ntBASIC19.64■□□□□ 0.74
UBP1Q9NZI7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 KRT18P29-201ENST00000397031 1267 ntBASIC19.64■□□□□ 0.73
UBP1Q9NZI7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 TEX21P-204ENST00000641479 1693 ntBASIC19.64■□□□□ 0.73
UBP1Q9NZI7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
UBP1Q9NZI7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.63■□□□□ 0.73
UBP1Q9NZI7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
UBP1Q9NZI7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms