Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKS1Q9NXB0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 AC005181.1-201ENST00000604782 1256 ntBASIC19.06■□□□□ 0.64
MKS1Q9NXB0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.06■□□□□ 0.64
MKS1Q9NXB0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 ANO7L1-203ENST00000602586 1720 ntBASIC19.05■□□□□ 0.64
MKS1Q9NXB0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 NOC2LP2-201ENST00000407594 1944 ntBASIC19.05■□□□□ 0.64
MKS1Q9NXB0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKS1Q9NXB0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MKS1Q9NXB0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms