Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 TSPY15P-201ENST00000457163 923 ntBASIC17.89■□□□□ 0.45
HPF1Q9NWY4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 HLA-A-209ENST00000638375 975 ntBASIC17.89■□□□□ 0.45
HPF1Q9NWY4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 TCF3P1-201ENST00000423021 1937 ntBASIC17.89■□□□□ 0.45
HPF1Q9NWY4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPF1Q9NWY4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 FSCN1P1-201ENST00000568912 1481 ntBASIC17.88■□□□□ 0.45
HPF1Q9NWY4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HPF1Q9NWY4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 AC004980.1-204ENST00000429707 299 ntBASIC17.87■□□□□ 0.45
HPF1Q9NWY4 RBM17P1-201ENST00000453646 1190 ntBASIC17.87■□□□□ 0.45
HPF1Q9NWY4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 AC116562.2-201ENST00000507042 360 ntBASIC17.87■□□□□ 0.45
HPF1Q9NWY4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.87■□□□□ 0.45
HPF1Q9NWY4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 MIR6786-201ENST00000616843 113 ntBASIC17.86■□□□□ 0.45
HPF1Q9NWY4 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.86■□□□□ 0.45
HPF1Q9NWY4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 AC112907.3-201ENST00000577781 2400 ntBASIC17.86■□□□□ 0.45
HPF1Q9NWY4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.86■□□□□ 0.45
HPF1Q9NWY4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms