Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TLR9Q9NR96 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.49■□□□□ 0.87
TLR9Q9NR96 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
TLR9Q9NR96 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TLR9Q9NR96 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
TLR9Q9NR96 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TLR9Q9NR96 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TLR9Q9NR96 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.49■□□□□ 0.87
TLR9Q9NR96 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.48■□□□□ 0.87
TLR9Q9NR96 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.48■□□□□ 0.87
TLR9Q9NR96 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.48■□□□□ 0.87
TLR9Q9NR96 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.48■□□□□ 0.87
TLR9Q9NR96 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TLR9Q9NR96 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TLR9Q9NR96 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.48■□□□□ 0.87
TLR9Q9NR96 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.48■□□□□ 0.87
TLR9Q9NR96 NEK4P2-201ENST00000580004 1012 ntBASIC20.48■□□□□ 0.87
TLR9Q9NR96 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
TLR9Q9NR96 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.48■□□□□ 0.87
TLR9Q9NR96 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.48■□□□□ 0.87
TLR9Q9NR96 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TLR9Q9NR96 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR9Q9NR96 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TLR9Q9NR96 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TLR9Q9NR96 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TLR9Q9NR96 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TLR9Q9NR96 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.47■□□□□ 0.87
TLR9Q9NR96 ZNF444P1-201ENST00000559497 298 ntBASIC20.47■□□□□ 0.87
TLR9Q9NR96 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
TLR9Q9NR96 AC083849.1-201ENST00000615227 514 ntBASIC20.47■□□□□ 0.87
TLR9Q9NR96 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TLR9Q9NR96 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TLR9Q9NR96 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TLR9Q9NR96 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TLR9Q9NR96 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.47■□□□□ 0.87
TLR9Q9NR96 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TLR9Q9NR96 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TLR9Q9NR96 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TLR9Q9NR96 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TLR9Q9NR96 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.46■□□□□ 0.87
TLR9Q9NR96 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TLR9Q9NR96 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TLR9Q9NR96 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.46■□□□□ 0.87
TLR9Q9NR96 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.46■□□□□ 0.87
TLR9Q9NR96 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
TLR9Q9NR96 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.46■□□□□ 0.87
TLR9Q9NR96 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.46■□□□□ 0.87
TLR9Q9NR96 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.46■□□□□ 0.87
TLR9Q9NR96 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.46■□□□□ 0.87
TLR9Q9NR96 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
TLR9Q9NR96 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TLR9Q9NR96 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.45■□□□□ 0.87
TLR9Q9NR96 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TLR9Q9NR96 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.45■□□□□ 0.86
TLR9Q9NR96 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.45■□□□□ 0.86
TLR9Q9NR96 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TLR9Q9NR96 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TLR9Q9NR96 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TLR9Q9NR96 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TLR9Q9NR96 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TLR9Q9NR96 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.45■□□□□ 0.86
TLR9Q9NR96 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TLR9Q9NR96 STARP1-201ENST00000397973 869 ntBASIC20.45■□□□□ 0.86
TLR9Q9NR96 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TLR9Q9NR96 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.45■□□□□ 0.86
TLR9Q9NR96 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.45■□□□□ 0.86
TLR9Q9NR96 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.45■□□□□ 0.86
TLR9Q9NR96 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.45■□□□□ 0.86
TLR9Q9NR96 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TLR9Q9NR96 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms