Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
ARHGEF3Q9NR81 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.4■□□□□ 0.86
ARHGEF3Q9NR81 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ARHGEF3Q9NR81 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ARHGEF3Q9NR81 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ARHGEF3Q9NR81 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ARHGEF3Q9NR81 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ARHGEF3Q9NR81 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.39■□□□□ 0.86
ARHGEF3Q9NR81 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ARHGEF3Q9NR81 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ARHGEF3Q9NR81 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.39■□□□□ 0.86
ARHGEF3Q9NR81 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ARHGEF3Q9NR81 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 MIR2861-201ENST00000636310 90 ntBASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ARHGEF3Q9NR81 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 FSCN1P1-201ENST00000568912 1481 ntBASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 AL512408.1-201ENST00000569378 2000 ntBASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 EGLN1P1-201ENST00000531623 762 ntBASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 AC026271.3-201ENST00000571884 352 ntBASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARHGEF3Q9NR81 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 AC099778.1-201ENST00000568593 1911 ntBASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 UPK3BP1-201ENST00000428678 509 ntBASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 ECEL1P2-202ENST00000465689 757 ntBASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 AP005242.2-201ENST00000580065 1175 ntBASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 TNXA-203ENST00000507684 2038 ntBASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ARHGEF3Q9NR81 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 AP000974.1-201ENST00000623909 2387 ntBASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF3Q9NR81 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms