Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 UBE2SP1-201ENST00000450587 669 ntBASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 AP006587.1-201ENST00000534129 1502 ntBASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NECTIN3Q9NQS3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 AP001271.2-201ENST00000624018 1556 ntBASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 AC066615.1-201ENST00000640911 628 ntBASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 AC005332.7-201ENST00000614046 2005 ntBASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NECTIN3Q9NQS3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NECTIN3Q9NQS3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
NECTIN3Q9NQS3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 AC009237.14-201ENST00000609975 1594 ntBASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NECTIN3Q9NQS3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NECTIN3Q9NQS3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms